CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g39124
(
Romanomermis culicivorax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nRc.2.0.1.g39124
T155506_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t39124-RA
C2H2 ZF
242
265
VQCQLCLKTYCDKGALKIHYSAVH
nRc.2.0.1.t39124-RA
C2H2 ZF
270
293
HKCTVAGCNMVFPSRRSRNRHSQN
Links
Other
C2H2 ZF
family TFs
Other
Romanomermis culicivorax
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL013374
Aedes aegypti
AAEL013374
N
0.783
EFV52039
Trichinella spiralis
EFV52039
N
0.783
GF17143
Drosophila ananassae
FBgn0094162
N
0.783
GF17175
Drosophila ananassae
FBgn0094193
N
0.783
GH12158
Drosophila grimshawi
FBgn0119637
N
0.783
GI10902
Drosophila mojavensis
FBgn0133665
N
0.783
GJ18548
Drosophila virilis
FBgn0205706
N
0.783
HMEL014400
Heliconius melpomene
HMEL014400
N
0.783
ISCW018372
Ixodes scapularis
ISCW018372
N
0.783
KGM_20032
Danaus plexippus
KGM_20032
N
0.783
MCINX008008
Melitaea cinxia
MCINX008008
N
0.783
RPRC004296
Rhodnius prolixus
RPRC004296
N
0.783
TC001693
Tribolium castaneum
TC001693
N
0.783
CLEC006296
Cimex lectularius
CLEC006296
N
0.783
HHAL001513-PA
Halyomorpha halys
HHAL001513-PA
N
0.783
LCUP009247
Lucilia cuprina
LCUP009247
N
0.783
AEPI009424
Anopheles epiroticus
AEPI009424
N
0.783
AMAM014362
Anopheles maculatus
AMAM014362
N
0.783
MDOA010514
Musca domestica
MDOA010514
N
0.783
BTMF_0001429901
Brugia timori
BTMF_0001429901
N
0.783
BXY_1035000
Bursaphelenchus xylophilus
BXY_1035000
N
0.783
D917_04255
Trichinella nativa
D917_04255
N
0.783
D918_00954
Trichuris suis
D918_00954
N
0.783
PTRK_0001274900
Parastrongyloides trichosuri
PTRK_0001274900
N
0.783
TTRE_0000574401
Trichuris trichiura
TTRE_0000574401
N
0.783
Minc05254
Meloidogyne incognita
Minc05254
N
0.781
BXY_1034900
Bursaphelenchus xylophilus
BXY_1034900
I
0.762
CapteG78125
Capitella teleta
CapteG78125
N
0.759
BGLB008222
Biomphalaria glabrata
BGLB008222
N
0.759
L893_g32898
Steinernema glaseri
L893_g32898
N
0.759
scaffold1098-EXSNAP2012.1
Pristionchus exspectatus
scaffold1098-EXSNAP2012.1
N
0.757