CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold122-EXSNAP2012.21
(
Pristionchus exspectatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
scaffold122-EXSNAP2012.21
T156004_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold122-EXSNAP2012.21
C2H2 ZF
177
198
FSCERCGKVFSYEYYRDKHLKY
scaffold122-EXSNAP2012.21
C2H2 ZF
209
232
FPCPICPRSFEKRDRLRIHVLHVH
scaffold122-EXSNAP2012.21
C2H2 ZF
238
260
HVCSVCSKSFSQSSSLNKHLRVH
scaffold122-EXSNAP2012.21
C2H2 ZF
266
288
YKCPFCTKSFTASSILRTHIRQH
scaffold122-EXSNAP2012.21
C2H2 ZF
304
318
FQCCHCGKAFASHAA
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus exspectatus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F47E1.3
Caenorhabditis elegans
WBGene00018567
N
0.768
CRE14814
Caenorhabditis remanei
CRE14814
N
0.766