CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F47E1.3
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00018567
T131628_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F47E1.3
C2H2 ZF
463
484
FSCERCGKVFSYEYYRDKHLKY
F47E1.3
C2H2 ZF
495
518
FPCTICNRSFEKRDRLRIHILHVH
F47E1.3
C2H2 ZF
524
546
HVCSVCQKSFSQSSSLNKHLRVH
F47E1.3
C2H2 ZF
552
574
YKCSFCPKAFTASSILRTHVRQH
F47E1.3
C2H2 ZF
580
603
FKCAHCGKAFASHAAHDSHVRRSH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE14814
Caenorhabditis remanei
CRE14814
N
0.825
ANCCEY_01743
Ancylostoma ceylanicum
ANCCEY_01743
N
0.797
SMU15027586
Schmidtea mediterranea
SMU15027586
N
0.792
SVUK_0000940401
Strongylus vulgaris
SVUK_0000940401
N
0.789
TMUE_s0104004100
Trichuris muris
TMUE_s0104004100
N
0.788
ENSFALG00000008315
Ficedula albicollis
ENSFALG00000008315
N
0.785
ENSTGUG00000011457
Taeniopygia guttata
ENSTGUG00000011457
N
0.785
Brh_R010198
Buceros rhinoceros
Brh_R010198
N
0.785
ENSGMOG00000016524
Gadus morhua
ENSGMOG00000016524
N
0.783
prdm14
Takifugu rubripes
ENSTRUG00000011758
N
0.783
Pvit_15018
Pogona vitticeps
Pvit_15018
N
0.781
ENSOANG00000022146
Ornithorhynchus anatinus
ENSOANG00000022146
N
0.779
NBR_0001957501
Nippostrongylus brasiliensis
NBR_0001957501
N
0.778
SBAD_0000104601
Soboliphyme baturini
SBAD_0000104601
N
0.778
HCOI00592400
Haemonchus contortus
HCOI00592400
N
0.776
HPLM_0001086701
Haemonchus placei
HPLM_0001086701
N
0.776
EVEC_0000137401
Enterobius vermicularis
EVEC_0000137401
N
0.773
nDi.2.2.2.g10196
Dirofilaria immitis
nDi.2.2.2.g10196
N
0.768
scaffold122-EXSNAP2012.21
Pristionchus exspectatus
scaffold122-EXSNAP2012.21
N
0.768
PRDM14
Echinops telfairi
ENSETEG00000012290
N
0.767
PRDM14
Loxodonta africana
ENSLAFG00000015637
N
0.767
BGLB009174
Biomphalaria glabrata
BGLB009174
N
0.766