CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TMUE_s0104004100
(
Trichuris muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TMUE_s0104004100
T157920_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TMUE_s0104004100
C2H2 ZF
271
292
FQCDRCGKVFTYKYYRDKHLKY
TMUE_s0104004100
C2H2 ZF
303
326
YPCHLCSRSFEKRDRLRIHILHVH
TMUE_s0104004100
C2H2 ZF
332
354
HVCTVCGKQFSQSSSLNKHMRVH
TMUE_s0104004100
C2H2 ZF
360
382
YKCIYCTKAFTASSILRTHIRQH
TMUE_s0104004100
C2H2 ZF
388
411
FKCKYCGKAFASHAAHDSHVRRTH
Links
Other
C2H2 ZF
family TFs
Other
Trichuris muris
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SBAD_0000104601
Soboliphyme baturini
SBAD_0000104601
N
0.809
ENSGMOG00000016524
Gadus morhua
ENSGMOG00000016524
N
0.801
prdm14
Takifugu rubripes
ENSTRUG00000011758
N
0.801
ENSFALG00000008315
Ficedula albicollis
ENSFALG00000008315
N
0.799
ENSTGUG00000011457
Taeniopygia guttata
ENSTGUG00000011457
N
0.799
Brh_R010198
Buceros rhinoceros
Brh_R010198
N
0.799
Pvit_15018
Pogona vitticeps
Pvit_15018
N
0.795
BGLB009174
Biomphalaria glabrata
BGLB009174
N
0.793
CRE14814
Caenorhabditis remanei
CRE14814
N
0.788
F47E1.3
Caenorhabditis elegans
WBGene00018567
N
0.788
ANCCEY_01743
Ancylostoma ceylanicum
ANCCEY_01743
N
0.785
PRDM14
Echinops telfairi
ENSETEG00000012290
N
0.784
PRDM14
Loxodonta africana
ENSLAFG00000015637
N
0.784
ENSOANG00000022146
Ornithorhynchus anatinus
ENSOANG00000022146
N
0.779
SMU15027586
Schmidtea mediterranea
SMU15027586
N
0.777
SVUK_0000940401
Strongylus vulgaris
SVUK_0000940401
N
0.775
EVEC_0000137401
Enterobius vermicularis
EVEC_0000137401
N
0.773
nDi.2.2.2.g10196
Dirofilaria immitis
nDi.2.2.2.g10196
N
0.763
HCOI00592400
Haemonchus contortus
HCOI00592400
N
0.760
HPLM_0001086701
Haemonchus placei
HPLM_0001086701
N
0.760