CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0001086701
(
Haemonchus placei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HPLM_0001086701
T154266_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001086701-mRNA-1
C2H2 ZF
39
60
FSCERCGKVFSYSYYRDKHLKY
HPLM_0001086701-mRNA-1
C2H2 ZF
71
94
FPCPICPRSFEKKDRLRIHCLHVH
HPLM_0001086701-mRNA-1
C2H2 ZF
100
122
HLCNVCGKAFSQSSSLNKHLRVH
HPLM_0001086701-mRNA-1
C2H2 ZF
128
150
YKCPFCPKAFTASSILRTHMRQH
HPLM_0001086701-mRNA-1
C2H2 ZF
156
179
FMCAYCGKSFASHAAHDSHVRRNH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus placei
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00592400
Haemonchus contortus
HCOI00592400
N
0.827
NBR_0001957501
Nippostrongylus brasiliensis
NBR_0001957501
N
0.801
ANCCEY_01743
Ancylostoma ceylanicum
ANCCEY_01743
N
0.800
SVUK_0000940401
Strongylus vulgaris
SVUK_0000940401
N
0.789
F47E1.3
Caenorhabditis elegans
WBGene00018567
N
0.776
CRE14814
Caenorhabditis remanei
CRE14814
N
0.774
BGLB009174
Biomphalaria glabrata
BGLB009174
N
0.769
SMU15027586
Schmidtea mediterranea
SMU15027586
N
0.761
TMUE_s0104004100
Trichuris muris
TMUE_s0104004100
N
0.760
ENSFALG00000008315
Ficedula albicollis
ENSFALG00000008315
N
0.759
ENSTGUG00000011457
Taeniopygia guttata
ENSTGUG00000011457
N
0.759
Brh_R010198
Buceros rhinoceros
Brh_R010198
N
0.759
ENSGMOG00000016524
Gadus morhua
ENSGMOG00000016524
N
0.757
prdm14
Takifugu rubripes
ENSTRUG00000011758
N
0.757
Pvit_15018
Pogona vitticeps
Pvit_15018
N
0.757
SBAD_0000104601
Soboliphyme baturini
SBAD_0000104601
N
0.757