CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15027586
(
Schmidtea mediterranea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMU15027586
T145158_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15027586
C2H2 ZF
354
375
FSCEQCGKMFAYEYYKAKHLKY
SMU15027586
C2H2 ZF
386
409
FPCSQCSRSFEKRDRLRIHVLHVH
SMU15027586
C2H2 ZF
415
437
HKCTVCGKSFSQSSSLNKHLRVH
SMU15027586
C2H2 ZF
443
465
YKCVYCDKAFTASSILRTHIRQH
SMU15027586
C2H2 ZF
471
494
FKCKYCWKSFASHAAHDSHVRRTH
Links
Other
C2H2 ZF
family TFs
Other
Schmidtea mediterranea
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F47E1.3
Caenorhabditis elegans
WBGene00018567
N
0.792
CRE14814
Caenorhabditis remanei
CRE14814
N
0.790
ENSFALG00000008315
Ficedula albicollis
ENSFALG00000008315
N
0.787
ENSTGUG00000011457
Taeniopygia guttata
ENSTGUG00000011457
N
0.787
Brh_R010198
Buceros rhinoceros
Brh_R010198
N
0.787
ENSGMOG00000016524
Gadus morhua
ENSGMOG00000016524
N
0.784
prdm14
Takifugu rubripes
ENSTRUG00000011758
N
0.784
Pvit_15018
Pogona vitticeps
Pvit_15018
N
0.784
ANCCEY_01743
Ancylostoma ceylanicum
ANCCEY_01743
N
0.782
ENSOANG00000022146
Ornithorhynchus anatinus
ENSOANG00000022146
N
0.780
TMUE_s0104004100
Trichuris muris
TMUE_s0104004100
N
0.777
PRDM14
Echinops telfairi
ENSETEG00000012290
N
0.775
PRDM14
Loxodonta africana
ENSLAFG00000015637
N
0.775
BGLB009174
Biomphalaria glabrata
BGLB009174
N
0.775
SBAD_0000104601
Soboliphyme baturini
SBAD_0000104601
N
0.775
SVUK_0000940401
Strongylus vulgaris
SVUK_0000940401
N
0.772
HCOI00592400
Haemonchus contortus
HCOI00592400
N
0.761
HPLM_0001086701
Haemonchus placei
HPLM_0001086701
N
0.761
EVEC_0000137401
Enterobius vermicularis
EVEC_0000137401
N
0.759
NBR_0001957501
Nippostrongylus brasiliensis
NBR_0001957501
N
0.756