CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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T265_00397
(
Opisthorchis viverrini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
T265_00397
T157498_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_00397
C2H2 ZF
236
260
YQCTYPGCSKAYYKRSHLNEHSHLH
T265_00397
C2H2 ZF
266
290
HLCGQPGCGARFTRADQLSRHRRAH
T265_00397
C2H2 ZF
296
317
FFCKVCQRRFKRSDHLKVHLSR
Links
Other
C2H2 ZF
family TFs
Other
Opisthorchis viverrini
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin106566
Clonorchis sinensis
csin106566
N
0.824
TRE_0000922201
Trichobilharzia regenti
TRE_0000922201
N
0.809
Smp_172480
Schistosoma mansoni
Smp_172480
N
0.777
SCUD_0000946401
Schistosoma curassoni
SCUD_0000946401
N
0.777
SMRZ_0000333601
Schistosoma margrebowiei
SMRZ_0000333601
N
0.777
SMTD_0000528101
Schistosoma mattheei
SMTD_0000528101
N
0.777
SROB_0000403501
Schistosoma rodhaini
SROB_0000403501
N
0.777
D915_00576
Fasciola hepatica
D915_00576
N
0.774
ECPE_0000288901
Echinostoma caproni
ECPE_0000288901
N
0.774
PXEA_0003453401
Protopolystoma xenopodis
PXEA_0003453401
N
0.758