CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g121700
(
Brassica oleracea
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
Bo4g121700
T159789_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g121700.1
CBF/NF-Y
8
33
LLQQPYLHESRHVHALKRPRGSGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Brassica oleracea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra003867
Brassica rapa
Bra003867
N
0.846
HAP2C
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001597
N
0.846
MDP0000183865
Malus domestica
MDP0000183865
I
0.818
Bo1g134650
Brassica oleracea
Bo1g134650
N
0.769
Bra021527
Brassica rapa
Bra021527
N
0.769
GSMUA_Achr7G01070_001
Musa acuminata
GSMUA_Achr7G01070_001
N
0.731
OMERI03G19370
Oryza meridionalis
OMERI03G19370
I
0.731
POPTR_0018s07220
Populus trichocarpa
POPTR_0018s07220
N
0.731
cassava2701.m1
Manihot esculenta
cassava2701.m1
N
0.731
Eucgr.C00842
Eucalyptus grandis
Eucgr.C00842
N
0.731
POPTR_0016s05440
Populus trichocarpa
POPTR_0016s05440
I
0.708