CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ppa-nfya-1
(
Pristionchus pacificus
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
PPA20666
T160345_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA20666
CBF/NF-Y
4
46
FYRAEARARLESSGRVPKIRSKYLHESRHRHACNRVRGEGGKF
Links
Other
CBF/NF-Y
family TFs
Other
Pristionchus pacificus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMU15029949
Schmidtea mediterranea
SMU15029949
I
0.744
WBGene00242147
Onchocerca volvulus
WBGene00242147
I
0.721
nAv.1.0.1.g00776
Acanthocheilonema viteae
nAv.1.0.1.g00776
I
0.721
nLs.2.1.2.g05605
Litomosoides sigmodontis
nLs.2.1.2.g05605
I
0.721
nOo.2.0.1.g03339
Onchocerca ochengi
nOo.2.0.1.g03339
I
0.721
scaffold5-EXSNAP2012.16
Pristionchus exspectatus
scaffold5-EXSNAP2012.16
I
0.714