CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc00034
(
Meloidogyne incognita
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
IPR006695
Minc00034
T162645_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc00034
CENPB
114
158
KNIKMIKMGVHRNSRTSMRKVAREPGISERTVRRIAKNKLGLKPY
Links
Other
CENPB
family TFs
Other
Meloidogyne incognita
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
snap_masked-nMf.1.1.scaf00087-processed-gene-0.19
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf00087-processed-gene-0.19
N
0.833
Minc15836
Meloidogyne incognita
Minc15836
N
0.810
Minc04453
Meloidogyne incognita
Minc04453
N
0.786
Minc11525
Meloidogyne incognita
Minc11525
N
0.762
maker-nMf.1.1.scaf31333-snap-gene-0.1
Meloidogyne floridensis
maker-nMf.1.1.scaf31333-snap-gene-0.1
N
0.714