CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf31333-snap-gene-0.1
(
Meloidogyne floridensis
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
IPR006695
maker-nMf.1.1.scaf31333-snap-gene-0.1
T162844_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf31333-snap-gene-0.1-mRNA-1
CENPB
55
93
KNIKMVKMWVHLNYRPSVRKLARETGISERTVRRIAKNK
Links
Other
CENPB
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc11525
Meloidogyne incognita
Minc11525
N
0.750
Minc00034
Meloidogyne incognita
Minc00034
N
0.714
genemark-nMf.1.1.scaf17372-processed-gene-0.0
Meloidogyne floridensis
genemark-nMf.1.1.scaf17372-processed-gene-0.0
N
0.710