CBN30196 (Caenorhabditis brenneri)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 CBN30196 T164351_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-28
M01209_2.00 		Caenorhabditis elegans
AAAATAAA
TTTATTTT		 PBM
Lambert et al.(2019)
pTH10625 		0.970 0.970
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN30196 CSD 49 116

Links

Other CSD family TFs
Other Caenorhabditis brenneri TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN21642 Caenorhabditis brenneri CBN21642 I 1.000
CRE28214 Caenorhabditis remanei CRE28214 I 0.985
lin-28 Caenorhabditis elegans WBGene00003014 D 0.970
CJA35970 Caenorhabditis japonica CJA35970 I 0.955
CBG12720 Caenorhabditis briggsae CBG12720 I 0.939