CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-lag-1
(
Pristionchus pacificus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
PPA16712
T166247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA16712
CSL
17
173
SEKFFCPPPCVYLGGDGWKHKRMQVDSYRTHRLPRRLYKDARLAMLKSGSAMESTPDTEKIHEAQAGELCAFIGIGAPSDQERQSLDFSNHKVIALPSQDYCAAKSLYISDSDKRKYFELSVQFFYACAIDVGLFSSARIKVISKPSKKKQSMKNTD
Links
Other
CSL
family TFs
Other
Pristionchus pacificus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold595-EXSNAP2012.10
Pristionchus exspectatus
scaffold595-EXSNAP2012.10
N
0.947
CGOC_0000554601
Cylicostephanus goldi
CGOC_0000554601
N
0.768
DICVIV_03671
Dictyocaulus viviparus
DICVIV_03671
N
0.714
OESDEN_00868
Oesophagostomum dentatum
OESDEN_00868
N
0.714
NBR_0000281601
Nippostrongylus brasiliensis
NBR_0000281601
N
0.710
SVUK_0001898701
Strongylus vulgaris
SVUK_0001898701
N
0.710