CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0001898701
(
Strongylus vulgaris
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
SVUK_0001898701
T166496_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0001898701-mRNA-1
CSL
4
143
FRFFCPPPCIYLLGEGWKEKRNRVEALYKSFKEHQKRMGVAPELGPEHERISEQQASELCAFIGIGAPSDQERQQLDFSNGKDYCAAKTLYISDSDKRKYFELSIQFFYGCGVEIGLFLSQRIKVISKPSKKKQSMKNTD
Links
Other
CSL
family TFs
Other
Strongylus vulgaris
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGOC_0000554601
Cylicostephanus goldi
CGOC_0000554601
N
1.000
NBR_0000281601
Nippostrongylus brasiliensis
NBR_0000281601
N
1.000
ANCCAN_18250
Ancylostoma caninum
ANCCAN_18250
N
0.992
DICVIV_03671
Dictyocaulus viviparus
DICVIV_03671
N
0.992
OESDEN_00868
Oesophagostomum dentatum
OESDEN_00868
N
0.992
HCOI00218000
Haemonchus contortus
HCOI00218000
N
0.884
HCOI01422600
Haemonchus contortus
HCOI01422600
N
0.884
HPLM_0000748001
Haemonchus placei
HPLM_0000748001
N
0.884
NECAME_18743
Necator americanus
NECAME_18743
N
0.878
ANCDUO_05680
Ancylostoma duodenale
ANCDUO_05680
N
0.840
TELCIR_20071
Teladorsagia circumcincta
TELCIR_20071
N
0.832
NBR_0002014201
Nippostrongylus brasiliensis
NBR_0002014201
N
0.774
Hba_17078
Heterorhabditis bacteriophora
Hba_17078
N
0.771
scaffold595-EXSNAP2012.10
Pristionchus exspectatus
scaffold595-EXSNAP2012.10
N
0.714
Ppa-lag-1
Pristionchus pacificus
PPA16712
N
0.710
TCLT_0000154801
Thelazia callipaeda
TCLT_0000154801
N
0.710