maker-pve_contig_114-snap-gene-0.40 (Pythium vexans)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 maker-pve_contig_114-snap-gene-0.40 T173258_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.38.2.1
M01968_2.00 		Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN		 PBM
Weirauch et al.(2014)
pTH5707 		0.455 0.455
estExt_gwp_gw1.C_220046
M01225_2.00 		Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB		 PBM
Lambert et al.(2019)
pTH9809 		0.455 0.455
E2FA
M06871_2.00 		Arabidopsis thaliana
NDDDGGCGCCAWWW
WWWTGGCGCCHHHN		 Dap-seq
OMalley et al.(2016)
E2FA_col_a 		0.455 0.455
E2FA
M06872_2.00 		Arabidopsis thaliana
DDWDGGCGCCAWAD
HTWTGGCGCCHWHH		 Dap-seq
OMalley et al.(2016)
E2FA_colamp_a 		0.455 0.455
E2FA
M08106_2.00 		Arabidopsis thaliana
NVGCGCCAHN
NDTGGCGCBN		 ChIP-seq
Mathelier et al.(2014)
MA1414.1 		0.455 0.455
E2FC
M06870_2.00 		Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT		 Dap-seq
OMalley et al.(2016)
E2FC_col_a 		0.445 0.445
ENSACAG00000013716
M01960_2.00 		Anolis carolinensis
HNVGCGCBND
HNVGCGCBND		 PBM
Weirauch et al.(2014)
pTH9221 		0.436 0.436
E2F3
M01964_2.00 		Taeniopygia guttata
NNSGCGCGMN
NKCGCGCSNN		 PBM
Weirauch et al.(2014)
pTH9288 		0.436 0.436
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPV00000016015 E2F 76 140
EPrPV00000016015 E2F 165 224

Links

Other E2F family TFs
Other Pythium vexans TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PYU1_G011913 Pythium ultimum PYU1_G011913 I 0.689
maker-pag1_scaffold_107-snap-gene-0.23 Pythium aphanidermatum maker-pag1_scaffold_107-snap-gene-0.23 I 0.555
maker-piw_contig_136-snap-gene-0.25 Pythium iwayamai maker-piw_contig_136-snap-gene-0.25 I 0.555
fgenesh_masked-par_contig_1752-abinit-gene-0.19 Pythium arrhenomanes fgenesh_masked-par_contig_1752-abinit-gene-0.19 I 0.545
HpaG813588 Hyaloperonospora arabidopsidis HpaG813588 N 0.519
ALNC14_009330 Albugo laibachii ALNC14_009330 I 0.509
Phyra53344 Phytophthora ramorum Phyra53344 I 0.509
SPRG_02714 Saprolegnia parasitica SPRG_02714 I 0.500
F443_00888 Phytophthora parasitica F443_00888 I 0.500
fgenesh_scip_prom.28083.5694 Phytophthora lateralis fgenesh_scip_prom.28083.5694 I 0.500
PITG_01579 Phytophthora infestans PITG_01579 I 0.500
estExt_fgenesh1_pg.C_1330005 Phytophthora capsici estExt_fgenesh1_pg.C_1330005 I 0.500
fgenesh_scip_prom.46568.2153 Phytophthora kernoviae fgenesh_scip_prom.46568.2153 I 0.482
EMIHUDRAFT_458951 Emiliania huxleyi EMIHUDRAFT_458951 I 0.473
EMIHUDRAFT_465850 Emiliania huxleyi EMIHUDRAFT_465850 I 0.473
Physo155323 Phytophthora sojae Physo155323 I 0.473
ATE2F2 Populus trichocarpa POPTR_0002s02500 I 0.473
Solyc06g074010.2 Solanum lycopersicum Solyc06g074010.2 I 0.473
SapurV1A.0025s0470 Salix purpurea SapurV1A.0025s0470 I 0.473
e_gw1.2.455.1 Phytophthora capsici e_gw1.2.455.1 I 0.473
AC233850.1_FG005 Zea mays AC233850.1_FG005 I 0.464
BGIBMGA003403 Bombyx mori BGIBMGA003403 I 0.464
BGIOSGA006304 Oryza indica BGIOSGA006304 I 0.464
HMEL015237 Heliconius melpomene HMEL015237 I 0.464
KGM_08064 Danaus plexippus KGM_08064 I 0.464
MCINX003175 Melitaea cinxia MCINX003175 I 0.464
OB02G27210 Oryza brachyantha OB02G27210 I 0.464
OBART02G19430 Oryza barthii OBART02G19430 I 0.464
OGLUM02G19730 Oryza glumaepatula OGLUM02G19730 I 0.464
OLONG_023990 Oryza longistaminata OLONG_023990 I 0.464
OMERI02G19320 Oryza meridionalis OMERI02G19320 I 0.464
ONIVA02G21500 Oryza nivara ONIVA02G21500 I 0.464
OPUNC02G17370 Oryza punctata OPUNC02G17370 I 0.464
ORGLA02G0166600 Oryza glaberrima ORGLA02G0166600 I 0.464
ORUFI02G20490 Oryza rufipogon ORUFI02G20490 I 0.464
OS02G0537500 Oryza sativa OS02G0537500 I 0.464
POPTR_0006s22150 Populus trichocarpa POPTR_0006s22150 I 0.464
POPTR_0016s07310 Populus trichocarpa POPTR_0016s07310 I 0.464
Sb04g021970 Sorghum bicolor Sb04g021970 I 0.464
Si017108m.g Setaria italica Si017108m.g I 0.464
TCM_022853 Theobroma cacao TCM_022853 I 0.464
TCM_046885 Theobroma cacao TCM_046885 I 0.464
Ca_04894 Cicer arietinum Ca_04894 I 0.464
28324.m000396 Ricinus communis 28324.m000396 I 0.464
Cagra.5627s0006 Capsella grandiflora Cagra.5627s0006 I 0.464
Carubv10003027m.g Capsella rubella Carubv10003027m.g I 0.464
estExt_Genemark1.C_30279 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_30279 I 0.464
Lus10016972.g Linum usitatissimum Lus10016972.g I 0.464
Lus10021298.g Linum usitatissimum Lus10021298.g I 0.464
Pavir.Ab01863 Panicum virgatum Pavir.Ab01863 I 0.464
Pavir.J38646 Panicum virgatum Pavir.J38646 I 0.464
SapurV1A.1401s0050 Salix purpurea SapurV1A.1401s0050 I 0.464
SapurV1A.1444s0050 Salix purpurea SapurV1A.1444s0050 I 0.464
estExt_fgeneshCV_pg.C_30214 Chlorella vulgaris estExt_fgeneshCV_pg.C_30214 I 0.464
AMTR_s00030p00231260 Amborella trichopoda AMTR_s00030p00231260 I 0.455
AMTR_s00220p00023690 Amborella trichopoda AMTR_s00220p00023690 I 0.455
E2FA Arabidopsis thaliana AT2G36010 D 0.455
E2FB Arabidopsis thaliana AT5G22220 I 0.455
BGIOSGA036595 Oryza indica BGIOSGA036595 I 0.455
Bo3g015790 Brassica oleracea Bo3g015790 I 0.455
Bo3g029900 Brassica oleracea Bo3g029900 I 0.455
Bo4g035150 Brassica oleracea Bo4g035150 I 0.455
Bra005305 Brassica rapa Bra005305 I 0.455
Bra006615 Brassica rapa Bra006615 I 0.455
Bra023047 Brassica rapa Bra023047 I 0.455
BRADI3G45130 Brachypodium distachyon BRADI3G45130 I 0.455
BRADI4G42050 Brachypodium distachyon BRADI4G42050 I 0.455
CapteG92886 Capitella teleta CapteG92886 I 0.455
F775_13418 Aegilops tauschii F775_13418 I 0.455
fgenesh1_pg.9__218 Bigelowiella natans fgenesh1_pg.9__218 I 0.455
E2F3 Arabidopsis lyrata fgenesh2_kg.4__1634__AT2G36010.3 I 0.455
E2F1 Arabidopsis lyrata fgenesh2_kg.6__2206__AT5G22220.2 I 0.455
GLOINDRAFT_4310 Rhizophagus irregularis GLOINDRAFT_4310 I 0.455
GLYMA02G35850 Glycine max GLYMA02G35850 I 0.455
GLYMA04G02720 Glycine max GLYMA04G02720 I 0.455
GLYMA06G02738 Glycine max GLYMA06G02738 I 0.455
GLYMA10G09410 Glycine max GLYMA10G09410 I 0.455
GRMZM2G041701 Zea mays GRMZM2G041701 I 0.455
GRMZM2G052515 Zea mays GRMZM2G052515 I 0.455
GSMUA_Achr6G07100_001 Musa acuminata GSMUA_Achr6G07100_001 I 0.455
LPERR12G03370 Leersia perrieri LPERR12G03370 I 0.455
MLOC_11415 Hordeum vulgare MLOC_11415 I 0.455
MTR_3g113800 Medicago truncatula MTR_3g113800 I 0.455
NEMVEDRAFT_v1g245401 Nematostella vectensis NEMVEDRAFT_v1g245401 I 0.455
OB12G13530 Oryza brachyantha OB12G13530 I 0.455
OBART12G03570 Oryza barthii OBART12G03570 I 0.455
OGLUM12G04270 Oryza glumaepatula OGLUM12G04270 I 0.455
OLONG_000194 Oryza longistaminata OLONG_000194 I 0.455
OMERI12G01820 Oryza meridionalis OMERI12G01820 I 0.455
ONIVA12G03230 Oryza nivara ONIVA12G03230 I 0.455
OPUNC12G03430 Oryza punctata OPUNC12G03430 I 0.455
ORGLA12G0034600 Oryza glaberrima ORGLA12G0034600 I 0.455
ORUFI12G04170 Oryza rufipogon ORUFI12G04170 I 0.455
OS12G0158800 Oryza sativa OS12G0158800 I 0.455
POPTR_0004s21100 Populus trichocarpa POPTR_0004s21100 I 0.455
PRUPE_ppa005262mg Prunus persica PRUPE_ppa005262mg I 0.455
Sb08g003670 Sorghum bicolor Sb08g003670 I 0.455
SELMODRAFT_136738 Selaginella moellendorffii SELMODRAFT_136738 I 0.455
SELMODRAFT_137588 Selaginella moellendorffii SELMODRAFT_137588 I 0.455
Si010044m.g Setaria italica Si010044m.g I 0.455
Traes_5AL_7FFD17EDE Triticum aestivum Traes_5AL_7FFD17EDE I 0.455
Traes_5BL_9F73E599F Triticum aestivum Traes_5BL_9F73E599F I 0.455
Traes_5DL_26C867084 Triticum aestivum Traes_5DL_26C867084 I 0.455
Traes_6AS_9596E4B58 Triticum aestivum Traes_6AS_9596E4B58 I 0.455
TRIUR3_33184 Triticum urartu TRIUR3_33184 I 0.455
E2F3 Vitis vinifera VIT_08s0007g02510 I 0.455
Ca_14410 Cicer arietinum Ca_14410 I 0.455
Cla018710 Citrullus lanatus Cla018710 I 0.455
Pm028019 Prunus mume Pm028019 I 0.455
Cucsa.083720 Cucumis sativus Cucsa.083720 I 0.455
e_gw1.38.2.1 Physcomitrella patens e_gw1.38.2.1 D 0.455
estExt_fgenesh1_pm.C_970008 Physcomitrella patens estExt_fgenesh1_pm.C_970008 I 0.455
estExt_gwp_gw1.C_220046 Physcomitrella patens estExt_gwp_gw1.C_220046 D 0.455
fgeneshPB_pg.7__63 Phycomyces blakesleeanus fgeneshPB_pg.7__63 I 0.455
mgf014795m Mimulus guttatus mgf014795m I 0.455
Aquca_002_00087 Aquilegia coerulea Aquca_002_00087 I 0.455
Bostr.23794s0493 Boechera stricta Bostr.23794s0493 I 0.455
Bostr.26527s0055 Boechera stricta Bostr.26527s0055 I 0.455
Cagra.0993s0113 Capsella grandiflora Cagra.0993s0113 I 0.455
Carubv10022932m.g Capsella rubella Carubv10022932m.g I 0.455
Ciclev10011632m.g Citrus clementina Ciclev10011632m.g I 0.455
Eucgr.J00539 Eucalyptus grandis Eucgr.J00539 I 0.455
gene15311-v1.0-hybrid Fragaria vesca gene15311-v1.0-hybrid I 0.455
Gorai.007G366600 Gossypium raimondii Gorai.007G366600 I 0.455
Gorai.013G257100 Gossypium raimondii Gorai.013G257100 I 0.455
Lus10004217.g Linum usitatissimum Lus10004217.g I 0.455
Lus10029421.g Linum usitatissimum Lus10029421.g I 0.455
Lus10033151.g Linum usitatissimum Lus10033151.g I 0.455
orange1.1g015627m.g Citrus sinensis orange1.1g015627m.g I 0.455
Pavir.Ca00172 Panicum virgatum Pavir.Ca00172 I 0.455
Pavir.J28624 Panicum virgatum Pavir.J28624 I 0.455
SapurV1A.0125s0090 Salix purpurea SapurV1A.0125s0090 I 0.455
SapurV1A.0510s0180 Salix purpurea SapurV1A.0510s0180 I 0.455
Thhalv10015650m.g Eutrema salsugineum Thhalv10015650m.g I 0.455
Thhalv10016580m.g Eutrema salsugineum Thhalv10016580m.g I 0.455
PK18387.1 Cannabis sativa PK18387.1 I 0.455
E2FC Arabidopsis thaliana AT1G47870 D 0.445
Bo9g106030 Brassica oleracea Bo9g106030 I 0.445
Bra002398 Brassica rapa Bra002398 I 0.445
Bra017268 Brassica rapa Bra017268 I 0.445
CGI_10005743 Crassostrea gigas CGI_10005743 I 0.445
CHLREDRAFT_206364 Chlamydomonas reinhardtii CHLREDRAFT_206364 I 0.445
ENSCSAVG00000003104 Ciona savignyi ENSCSAVG00000003104 I 0.445
ENSLACG00000008759 Latimeria chalumnae ENSLACG00000008759 I 0.445
ATE2F2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003009 I 0.445
GLYMA11G18401 Glycine max GLYMA11G18401 I 0.445
GLYMA12G09860 Glycine max GLYMA12G09860 I 0.445
GRMZM2G333591 Zea mays GRMZM2G333591 I 0.445
GRMZM5G829408 Zea mays GRMZM5G829408 I 0.445
GSMUA_Achr2G20420_001 Musa acuminata GSMUA_Achr2G20420_001 I 0.445
GSMUA_Achr4G17950_001 Musa acuminata GSMUA_Achr4G17950_001 I 0.445
MTR_1g105110 Medicago truncatula MTR_1g105110 I 0.445
PGSC0003DMG400016418 Solanum tuberosum PGSC0003DMG400016418 I 0.445
PGSC0003DMG400019629 Solanum tuberosum PGSC0003DMG400019629 I 0.445
POPTR_0009s16350 Populus trichocarpa POPTR_0009s16350 I 0.445
Solyc01g007760.2 Solanum lycopersicum Solyc01g007760.2 I 0.445
Solyc11g068800.1 Solanum lycopersicum Solyc11g068800.1 I 0.445
TCM_041291 Theobroma cacao TCM_041291 I 0.445
E2F1 Vitis vinifera VIT_06s0080g01110 I 0.445
ATE2F2 Vitis vinifera VIT_18s0001g14110 I 0.445
Alligator_sinensis_CCG011120.1 Alligator sinensis Alligator_sinensis_CCG011120.1 I 0.445
Ca_15178 Cicer arietinum Ca_15178 I 0.445
Cla008768 Citrullus lanatus Cla008768 I 0.445
Pm006225 Prunus mume Pm006225 I 0.445
30055.m001619 Ricinus communis 30055.m001619 I 0.445
30170.m014171 Ricinus communis 30170.m014171 I 0.445
cassava31670.valid.m1 Manihot esculenta cassava31670.valid.m1 I 0.445
cassava31671.valid.m1 Manihot esculenta cassava31671.valid.m1 I 0.445
cassava4389.m1 Manihot esculenta cassava4389.m1 I 0.445
cassava45095.m1 Manihot esculenta cassava45095.m1 I 0.445
Cucsa.185850 Cucumis sativus Cucsa.185850 I 0.445
e_gw1.364.12.1 Physcomitrella patens e_gw1.364.12.1 I 0.445
EuGene.0000020846 Micromonas pusilla EuGene.0000020846 I 0.445
mgf018602m Mimulus guttatus mgf018602m I 0.445
Sakowv30029580m.g Saccoglossus kowalevskii Sakowv30029580m.g I 0.445
Aquca_006_00176 Aquilegia coerulea Aquca_006_00176 I 0.445
Aquca_072_00025 Aquilegia coerulea Aquca_072_00025 I 0.445
Bostr.15654s0048 Boechera stricta Bostr.15654s0048 I 0.445
Cagra.1843s0001 Capsella grandiflora Cagra.1843s0001 I 0.445
Carubv10009432m.g Capsella rubella Carubv10009432m.g I 0.445
Ciclev10028409m.g Citrus clementina Ciclev10028409m.g I 0.445
Eucgr.A02602 Eucalyptus grandis Eucgr.A02602 I 0.445
evm.TU.supercontig_104.59 Carica papaya evm.TU.supercontig_104.59 I 0.445
evm.TU.supercontig_195.40 Carica papaya evm.TU.supercontig_195.40 I 0.445
Gorai.001G123900 Gossypium raimondii Gorai.001G123900 I 0.445
Gorai.002G157200 Gossypium raimondii Gorai.002G157200 I 0.445
Lus10005209.g Linum usitatissimum Lus10005209.g I 0.445
orange1.1g012778m.g Citrus sinensis orange1.1g012778m.g I 0.445
orange1.1g015878m.g Citrus sinensis orange1.1g015878m.g I 0.445
SapurV1A.1836s0050 Salix purpurea SapurV1A.1836s0050 I 0.445
Thhalv10011567m.g Eutrema salsugineum Thhalv10011567m.g I 0.445
PK11630.1 Cannabis sativa PK11630.1 I 0.445
LjSGA_014916.1 Lotus japonicus LjSGA_014916.1 I 0.445
PDK_20s1576491g001 Phoenix dactylifera PDK_20s1576491g001 I 0.445
CAOG_01030 Capsaspora owczarzaki CAOG_01030 I 0.436
CpipJ_CPIJ006972 Culex pipiens CpipJ_CPIJ006972 I 0.436
RO3G_10439 Rhizopus oryzae RO3G_10439 I 0.436
RO3G_12705 Rhizopus oryzae RO3G_12705 I 0.436
AAEL012817 Aedes aegypti AAEL012817 I 0.436
Bo8g016640 Brassica oleracea Bo8g016640 I 0.436
Bra014096 Brassica rapa Bra014096 I 0.436
CPIJ006972 Culex quinquefasciatus CPIJ006972 I 0.436
ENSACAG00000013716 Anolis carolinensis ENSACAG00000013716 D 0.436
ENSAPLG00000005846 Anas platyrhynchos ENSAPLG00000005846 I 0.436
ENSFALG00000013508 Ficedula albicollis ENSFALG00000013508 I 0.436
e2f3 Gasterosteus aculeatus ENSGACG00000006632 I 0.436
si:ch211-160f23.5 Gasterosteus aculeatus ENSGACG00000009567 I 0.436
E2F3 Gallus gallus ENSGALG00000012680 I 0.436
ENSGMOG00000002446 Gadus morhua ENSGMOG00000002446 I 0.436
E2F3 Meleagris gallopavo ENSMGAG00000002510 I 0.436
ENSONIG00000003491 Oreochromis niloticus ENSONIG00000003491 I 0.436
ENSONIG00000007069 Oreochromis niloticus ENSONIG00000007069 I 0.436
E2F2 Ochotona princeps ENSOPRG00000005316 I 0.436
si:ch211-160f23.5 Oryzias latipes ENSORLG00000014356 I 0.436
ENSPFOG00000016235 Poecilia formosa ENSPFOG00000016235 I 0.436
E2F3 Taeniopygia guttata ENSTGUG00000006335 D 0.436
ENSXMAG00000009674 Xiphophorus maculatus ENSXMAG00000009674 I 0.436
GSMUA_Achr6G18220_001 Musa acuminata GSMUA_Achr6G18220_001 I 0.436
LotgiG171492 Lottia gigantea LotgiG171492 I 0.436
maker-pir_contig_77-snap-gene-0.27 Pythium irregulare maker-pir_contig_77-snap-gene-0.27 I 0.436
MTR_4g052000 Medicago truncatula MTR_4g052000 I 0.436
PRUPE_ppa014783mg Prunus persica PRUPE_ppa014783mg I 0.436
PRUPE_ppa024272mg Prunus persica PRUPE_ppa024272mg I 0.436
SELMODRAFT_229421 Selaginella moellendorffii SELMODRAFT_229421 I 0.436
SELMODRAFT_445661 Selaginella moellendorffii SELMODRAFT_445661 I 0.436
SPU_006753 Strongylocentrotus purpuratus SPU_006753 I 0.436
Afo_R015088 Aptenodytes forsteri Afo_R015088 I 0.436
Gfo_R000629 Geospiza fortis Gfo_R000629 I 0.436
Ogr13519 Ophisaurus gracilis Ogr13519 I 0.436
Pm029349 Prunus mume Pm029349 I 0.436
Pm031036 Prunus mume Pm031036 I 0.436
Tal_R000839 Tyto alba Tal_R000839 I 0.436
fgeneshMC_pg.2_#_537 Mucor circinelloides fgeneshMC_pg.2_#_537 I 0.436
gw.680.60.1 Branchiostoma floridae gw.680.60.1 I 0.436
mgf019070m Mimulus guttatus mgf019070m I 0.436
Ciclev10001165m.g Citrus clementina Ciclev10001165m.g I 0.436
Gorai.006G114300 Gossypium raimondii Gorai.006G114300 I 0.436
MDP0000150467 Malus domestica MDP0000150467 I 0.436
MDP0000172879 Malus domestica MDP0000172879 I 0.436
MDP0000197904 Malus domestica MDP0000197904 I 0.436
MDP0000200630 Malus domestica MDP0000200630 I 0.436
PDK_20s1616661g001 Phoenix dactylifera PDK_20s1616661g001 I 0.436