Solyc06g074010.2 (Solanum lycopersicum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 Solyc06g074010.2 T173492_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.38.2.1
M01968_2.00 		Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN		 PBM
Weirauch et al.(2014)
pTH5707 		0.431 0.431
estExt_gwp_gw1.C_220046
M01225_2.00 		Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB		 PBM
Lambert et al.(2019)
pTH9809 		0.431 0.431
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g074010.2.1 E2F 125 189
Solyc06g074010.2.1 E2F 529 593

Links

Other E2F family TFs
Other Solanum lycopersicum TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
augustus_masked-nMf.1.1.scaf01552-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01552-processed-gene-0.1 N 0.555
PYU1_G011913 Pythium ultimum PYU1_G011913 I 0.524
PGSC0003DMG402005932 Solanum tuberosum PGSC0003DMG402005932 I 0.500
maker-pve_contig_114-snap-gene-0.40 Pythium vexans maker-pve_contig_114-snap-gene-0.40 I 0.473
cassava31670.valid.m1 Manihot esculenta cassava31670.valid.m1 I 0.469
cassava31671.valid.m1 Manihot esculenta cassava31671.valid.m1 I 0.469
30055.m001619 Ricinus communis 30055.m001619 I 0.469
E2F1 Vitis vinifera VIT_06s0080g01110 I 0.469
POPTR_0009s16350 Populus trichocarpa POPTR_0009s16350 I 0.469
cassava45095.m1 Manihot esculenta cassava45095.m1 I 0.469
Ciclev10028409m.g Citrus clementina Ciclev10028409m.g I 0.469
PK11630.1 Cannabis sativa PK11630.1 I 0.469
orange1.1g012778m.g Citrus sinensis orange1.1g012778m.g I 0.469
Solyc11g068800.1 Solanum lycopersicum Solyc11g068800.1 I 0.462
TCM_041291 Theobroma cacao TCM_041291 I 0.462
Gorai.001G123900 Gossypium raimondii Gorai.001G123900 I 0.462
PDK_20s1576491g001 Phoenix dactylifera PDK_20s1576491g001 I 0.462
PDK_20s1616661g001 Phoenix dactylifera PDK_20s1616661g001 I 0.462
POPTR_0004s21100 Populus trichocarpa POPTR_0004s21100 I 0.462
SapurV1A.1836s0050 Salix purpurea SapurV1A.1836s0050 I 0.462
SapurV1A.0125s0090 Salix purpurea SapurV1A.0125s0090 I 0.462
MDP0000172879 Malus domestica MDP0000172879 I 0.462
Cucsa.185850 Cucumis sativus Cucsa.185850 I 0.462
MDP0000197904 Malus domestica MDP0000197904 I 0.462
MDP0000200630 Malus domestica MDP0000200630 I 0.462
MDP0000150467 Malus domestica MDP0000150467 I 0.462
PGSC0003DMG400019629 Solanum tuberosum PGSC0003DMG400019629 I 0.462
Cla008768 Citrullus lanatus Cla008768 I 0.462
GLYMA11G18401 Glycine max GLYMA11G18401 I 0.462
GLYMA12G09860 Glycine max GLYMA12G09860 I 0.462
Ca_15178 Cicer arietinum Ca_15178 I 0.454
E2F3 Vitis vinifera VIT_08s0007g02510 I 0.454
Ciclev10011632m.g Citrus clementina Ciclev10011632m.g I 0.454
orange1.1g015627m.g Citrus sinensis orange1.1g015627m.g I 0.454
Bra006615 Brassica rapa Bra006615 I 0.454
Pm028019 Prunus mume Pm028019 I 0.454
Bo3g015790 Brassica oleracea Bo3g015790 I 0.454
Thhalv10015650m.g Eutrema salsugineum Thhalv10015650m.g I 0.454
Bostr.26527s0055 Boechera stricta Bostr.26527s0055 I 0.454
Pm031036 Prunus mume Pm031036 I 0.454
Pm029349 Prunus mume Pm029349 I 0.454
Solyc01g007760.2 Solanum lycopersicum Solyc01g007760.2 I 0.454
evm.TU.supercontig_104.59 Carica papaya evm.TU.supercontig_104.59 I 0.454
PRUPE_ppa014783mg Prunus persica PRUPE_ppa014783mg I 0.454
PRUPE_ppa005262mg Prunus persica PRUPE_ppa005262mg I 0.454
GLYMA02G35850 Glycine max GLYMA02G35850 I 0.454
PGSC0003DMG400016418 Solanum tuberosum PGSC0003DMG400016418 I 0.454
Gorai.013G257100 Gossypium raimondii Gorai.013G257100 I 0.454
E2FB Arabidopsis thaliana AT5G22220 I 0.454
LjSGA_014916.1 Lotus japonicus LjSGA_014916.1 I 0.454
E2F1 Arabidopsis lyrata fgenesh2_kg.6__2206__AT5G22220.2 I 0.454
Gorai.006G114300 Gossypium raimondii Gorai.006G114300 I 0.454
Lus10005209.g Linum usitatissimum Lus10005209.g I 0.454
Aquca_072_00025 Aquilegia coerulea Aquca_072_00025 I 0.446
mgf018602m Mimulus guttatus mgf018602m I 0.446
Gorai.002G157200 Gossypium raimondii Gorai.002G157200 I 0.446
Eucgr.J00539 Eucalyptus grandis Eucgr.J00539 I 0.446
gene08432-v1.0-hybrid Fragaria vesca gene08432-v1.0-hybrid I 0.446
GLYMA10G09410 Glycine max GLYMA10G09410 I 0.446
Carubv10003027m.g Capsella rubella Carubv10003027m.g I 0.446
Cagra.5627s0006 Capsella grandiflora Cagra.5627s0006 I 0.446
evm.TU.supercontig_195.40 Carica papaya evm.TU.supercontig_195.40 I 0.446
Gorai.007G366600 Gossypium raimondii Gorai.007G366600 I 0.446
GSMUA_Achr6G07100_001 Musa acuminata GSMUA_Achr6G07100_001 I 0.446
28324.m000396 Ricinus communis 28324.m000396 I 0.446
PK18387.1 Cannabis sativa PK18387.1 I 0.446
TCM_022853 Theobroma cacao TCM_022853 I 0.446
Ca_14410 Cicer arietinum Ca_14410 I 0.446
gene15311-v1.0-hybrid Fragaria vesca gene15311-v1.0-hybrid I 0.438
BGIOSGA006304 Oryza indica BGIOSGA006304 I 0.438
OBART02G19430 Oryza barthii OBART02G19430 I 0.438
Si017108m.g Setaria italica Si017108m.g I 0.438
OGLUM02G19730 Oryza glumaepatula OGLUM02G19730 I 0.438
OS02G0537500 Oryza sativa OS02G0537500 I 0.438
ORUFI02G20490 Oryza rufipogon ORUFI02G20490 I 0.438
OPUNC02G17370 Oryza punctata OPUNC02G17370 I 0.438
ONIVA02G21500 Oryza nivara ONIVA02G21500 I 0.438
OMERI02G19320 Oryza meridionalis OMERI02G19320 I 0.438
OLONG_023990 Oryza longistaminata OLONG_023990 I 0.438
OB02G27210 Oryza brachyantha OB02G27210 I 0.438
Pavir.J38646 Panicum virgatum Pavir.J38646 I 0.438
Bo9g106030 Brassica oleracea Bo9g106030 I 0.438
GSMUA_Achr2G20420_001 Musa acuminata GSMUA_Achr2G20420_001 I 0.438
ORGLA02G0166600 Oryza glaberrima ORGLA02G0166600 I 0.438
Eucgr.A02602 Eucalyptus grandis Eucgr.A02602 I 0.438
Pavir.Ab01863 Panicum virgatum Pavir.Ab01863 I 0.438
Cucsa.083720 Cucumis sativus Cucsa.083720 I 0.438
Traes_6AS_9596E4B58 Triticum aestivum Traes_6AS_9596E4B58 I 0.438
MTR_4g052000 Medicago truncatula MTR_4g052000 I 0.438
Cla018710 Citrullus lanatus Cla018710 I 0.438
Bra002398 Brassica rapa Bra002398 I 0.438
BRADI3G45130 Brachypodium distachyon BRADI3G45130 I 0.431
AMTR_s00030p00231260 Amborella trichopoda AMTR_s00030p00231260 I 0.431
mgf014795m Mimulus guttatus mgf014795m I 0.431
AC233850.1_FG005 Zea mays AC233850.1_FG005 I 0.431
GSMUA_Achr6G18220_001 Musa acuminata GSMUA_Achr6G18220_001 I 0.431
SELMODRAFT_137588 Selaginella moellendorffii SELMODRAFT_137588 I 0.431
SELMODRAFT_136738 Selaginella moellendorffii SELMODRAFT_136738 I 0.431
PITG_06416 Phytophthora infestans PITG_06416 I 0.431
Sb04g021970 Sorghum bicolor Sb04g021970 I 0.431
GRMZM2G041701 Zea mays GRMZM2G041701 I 0.431
e_gw1.38.2.1 Physcomitrella patens e_gw1.38.2.1 D 0.431
Cagra.4239s0004 Capsella grandiflora Cagra.4239s0004 I 0.431
Carubv10018365m.g Capsella rubella Carubv10018365m.g I 0.431
Bostr.18473s0137 Boechera stricta Bostr.18473s0137 I 0.431
Aquca_002_00087 Aquilegia coerulea Aquca_002_00087 I 0.431
estExt_gwp_gw1.C_220046 Physcomitrella patens estExt_gwp_gw1.C_220046 D 0.431
BRADI5G01920 Brachypodium distachyon BRADI5G01920 I 0.431