CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g03748
(
Litomosoides sigmodontis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
nLs.2.1.2.g03748
T174347_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t03748-RA
E2F
391
458
KTKTLGLLCRKFLLEVLEHVNCGDGKINLETIASSMKVEKRRIYDVVNVMEALGAMKKSHKSFYTWEG
nLs.2.1.2.t03748-RA
E2F
555
636
LNSLTYLCKYFFKILIVGLDYQSDYKVSLDVASTILIKDPETVDCKPPDRSRCRRIYDVANVLISLLLIERKMFTFGTKKIP
Links
Other
E2F
family TFs
Other
Litomosoides sigmodontis
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_07147
Loa loa
LOAG_07147
N
0.924
nDi.2.2.2.g08162
Dirofilaria immitis
nDi.2.2.2.g08162
N
0.917
WUBG_01805
Wuchereria bancrofti
WUBG_01805
N
0.909
WBGene00247952
Onchocerca volvulus
WBGene00247952
N
0.909
nOo.2.0.1.g06441
Onchocerca ochengi
nOo.2.0.1.g06441
N
0.909
OFLC_0000212001
Onchocerca flexuosa
OFLC_0000212001
N
0.909
Bm4234
Brugia malayi
Bm4234
N
0.902
TCLT_0000737401
Thelazia callipaeda
TCLT_0000737401
N
0.629
CJA26768
Caenorhabditis japonica
CJA26768
I
0.583
efl-3
Caenorhabditis elegans
WBGene00009899
I
0.583
DICVIV_01764
Dictyocaulus viviparus
DICVIV_01764
I
0.583
HCOI01892600
Haemonchus contortus
HCOI01892600
I
0.583
TELCIR_03927
Teladorsagia circumcincta
TELCIR_03927
I
0.583
TCNE_0000873901
Toxocara canis
TCNE_0000873901
I
0.576
CBG00680
Caenorhabditis briggsae
CBG00680
I
0.570
CBN23380
Caenorhabditis brenneri
CBN23380
I
0.570
CRE01589
Caenorhabditis remanei
CRE01589
I
0.570
Minc04041
Meloidogyne incognita
Minc04041
I
0.568
Minc05731
Meloidogyne incognita
Minc05731
I
0.568
L889_g28422
Steinernema feltiae
L889_g28422
I
0.568
L893_g19965
Steinernema glaseri
L893_g19965
I
0.568
maker-nMf.1.1.scaf01659-augustus-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf01659-augustus-gene-0.9
I
0.568
MhA1_Contig130.frz3.gene44
Meloidogyne hapla
MhA1_Contig130.frz3.gene44
I
0.568
SMUV_0000434101
Syphacia muris
SMUV_0000434101
I
0.568
PPA21298
Pristionchus pacificus
PPA21298
I
0.561
L596_g12895
Steinernema carpocapsae
L596_g12895
I
0.561
L892_g1818
Steinernema scapterisci
L892_g1818
I
0.561
scaffold884-EXSNAP2012.1
Pristionchus exspectatus
scaffold884-EXSNAP2012.1
I
0.561
OESDEN_13289
Oesophagostomum dentatum
OESDEN_13289
I
0.556
ACAC_0000024001
Angiostrongylus cantonensis
ACAC_0000024001
I
0.553
ANCCAN_04600
Ancylostoma caninum
ANCCAN_04600
I
0.553
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0
I
0.553
HPBE_0000610601
Heligmosomoides bakeri
HPBE_0000610601
I
0.553
scaffold51-EXSNAP2012.35
Pristionchus exspectatus
scaffold51-EXSNAP2012.35
I
0.553
ASIM_0001001801
Anisakis simplex
ASIM_0001001801
I
0.541
ALUE_0000773501
Ascaris lumbricoides
ALUE_0000773501
I
0.538
ASU_04096
Ascaris suum
ASU_04096
I
0.538
BXY_1693900
Bursaphelenchus xylophilus
BXY_1693900
I
0.538
L898_g3621
Steinernema monticolum
L898_g3621
I
0.538
CGOC_0000227901
Cylicostephanus goldi
CGOC_0000227901
N
0.515
DME_0000727201
Dracunculus medinensis
DME_0000727201
I
0.477
nAv.1.0.1.g09262
Acanthocheilonema viteae
nAv.1.0.1.g09262
N
0.462
ENSONIG00000007135
Oreochromis niloticus
ENSONIG00000007135
I
0.432
e2f8
Oryzias latipes
ENSORLG00000000786
I
0.432
e2f8
Tetraodon nigroviridis
ENSTNIG00000009615
I
0.432
Aquca_025_00187
Aquilegia coerulea
Aquca_025_00187
I
0.432
EVEC_0001263301
Enterobius vermicularis
EVEC_0001263301
N
0.432