Ppa-unc-3 (Pristionchus pacificus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) PPA20518 T174770_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.836 0.836
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.776 0.776
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.776 0.776
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.776 0.776
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.776 0.776
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.776 0.776
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.776 0.776
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.776 0.776
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA20518 EBF1 2 68

Links

Other EBF1 family TFs
Other Pristionchus pacificus TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BTMF_0000130101 Brugia timori BTMF_0000130101 I 1.000
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.963
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.929
HMEL014948 Heliconius melpomene HMEL014948 I 0.929
LOAG_18199 Loa loa LOAG_18199 I 0.896
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.896
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.892
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.881
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I 0.881
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.878
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.875
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.875
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.875
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.875
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.851
NECAME_10162 Necator americanus NECAME_10162 I 0.851
SVUK_0001114801 Strongylus vulgaris SVUK_0001114801 I 0.851
GH12956 Drosophila grimshawi FBgn0120434 I 0.850
MCINX016126 Melitaea cinxia MCINX016126 I 0.850
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.841
GF11778 Drosophila ananassae FBgn0088818 I 0.836
GL10656 Drosophila persimilis FBgn0148266 I 0.836
GJ21945 Drosophila virilis FBgn0209060 I 0.836
GK23295 Drosophila willistoni FBgn0225257 I 0.836
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.836
KGM_09934 Danaus plexippus KGM_09934 I 0.836
ACHR004409 Anopheles christyi ACHR004409 I 0.836
AEPI003553 Anopheles epiroticus AEPI003553 I 0.836
AFUN004906 Anopheles funestus AFUN004906 I 0.836
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I 0.836
L889_g1820 Steinernema feltiae L889_g1820 I 0.836
L893_g31120 Steinernema glaseri L893_g31120 I 0.836
L898_g8304 Steinernema monticolum L898_g8304 I 0.836
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.823
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.823
LCUP013862 Lucilia cuprina LCUP013862 I 0.821
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.821
ACOM041529 Anopheles coluzzii ACOM041529 I 0.821
ACUA010350 Anopheles culicifacies ACUA010350 I 0.821
AFAF000230 Anopheles farauti AFAF000230 I 0.821
ASIS004664 Anopheles sinensis ASIS004664 I 0.821
MDOA011385 Musca domestica MDOA011385 I 0.821
GPLIN_000159400 Globodera pallida GPLIN_000159400 I 0.821
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.821
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I 0.821
CRE15310 Caenorhabditis remanei CRE15310 I 0.806
EFV50386 Trichinella spiralis EFV50386 I 0.806
D917_06660 Trichinella nativa D917_06660 I 0.806
ACEP22947 Atta cephalotes ACEP22947 I 0.800
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.800
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.800
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.797
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.797
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.794
CBG07590 Caenorhabditis briggsae CBG07590 I 0.791
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.791
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.791
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.791
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.791
AALB010330 Anopheles albimanus AALB010330 I 0.786
AATE014419 Anopheles atroparvus AATE014419 I 0.781
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.776
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.776
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.776
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.776
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.776
EBF2 Bos taurus ENSBTAG00000040390 I 0.776
EBF2 Canis familiaris ENSCAFG00000008918 I 0.776
EBF3 Canis familiaris ENSCAFG00000013267 I 0.776
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.776
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.776
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.776
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I 0.776
ebf1a Danio rerio ENSDARG00000099849 I 0.776
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.776
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.776
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.776
EBF3 Homo sapiens ENSG00000108001 D 0.776
EBF2 Homo sapiens ENSG00000221818 D 0.776
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.776
EBF2 Gallus gallus ENSGALG00000000242 I 0.776
EBF3 Gallus gallus ENSGALG00000010461 I 0.776
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.776
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.776
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.776
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.776
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.776
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.776
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.776
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.776
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.776
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.776
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I 0.776
Ebf3 Mus musculus ENSMUSG00000010476 I 0.776
Ebf4 Mus musculus ENSMUSG00000053552 D 0.776
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I 0.776
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.776
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.776
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.776
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.776
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.776
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.776
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.776
ebf3a Oryzias latipes ENSORLG00000005870 I 0.776
EBF4 Oryzias latipes ENSORLG00000020414 I 0.776
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.776
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.776
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.776
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.776
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.776
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.776
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.776
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.776
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.776
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.776
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.776
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.776
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.776
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.776
EBF2 Sus scrofa ENSSSCG00000009655 I 0.776
EBF1 Sus scrofa ENSSSCG00000017046 I 0.776
EBF1 Tupaia belangeri ENSTBEG00000007800 I 0.776
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.776
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.776
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.776
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.776
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.776
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.776
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.776
LotgiG225788 Lottia gigantea LotgiG225788 I 0.776
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.776
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.776
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.776
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.776
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.776
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.776
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.776
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.776
Tal_R004164 Tyto alba Tal_R004164 I 0.776
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.776
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.776
ebf2.S Xenopus laevis XB-GENE-971141 I 0.776
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.776
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.761
EBF3 Bos taurus ENSBTAG00000008272 I 0.761
ebf1b Danio rerio ENSDARG00000069196 I 0.761
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.761
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I 0.761
EBF1 Equus caballus ENSECAG00000007964 I 0.761
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I 0.761
EBF1 Homo sapiens ENSG00000164330 D 0.761
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.761
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.761
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I 0.761
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I 0.761
EBF3 Myotis lucifugus ENSMLUG00000005478 I 0.761
EBF1 Oryzias latipes ENSORLG00000007471 I 0.761
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.761
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.761
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.761
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I 0.761
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.761
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.761
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.761
Aan_R013029 Calypte anna Aan_R013029 I 0.761
Pvit_11383 Pogona vitticeps Pvit_11383 I 0.761
ADAC003479 Anopheles darlingi ADAC003479 I 0.757
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.754
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.754
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.754
CJA00446 Caenorhabditis japonica CJA00446 I 0.750
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.750
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.750
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.750
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.750
AARA002865 Anopheles arabiensis AARA002865 I 0.747
AQUA007473 Anopheles quadriannulatus AQUA007473 I 0.747
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.746
EBF1 Oryzias latipes ENSORLG00000002342 I 0.746
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I 0.746
HelroG112029 Helobdella robusta HelroG112029 I 0.746
csin100403 Clonorchis sinensis csin100403 N 0.746
T265_13606 Opisthorchis viverrini T265_13606 N 0.746
AMEC016105 Anopheles melas AMEC016105 I 0.743
AMEM017983 Anopheles merus AMEM017983 I 0.743
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.731
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.731
TsM_000377600 Taenia solium TsM_000377600 N 0.731
TTAC_0000009401 Hydatigera taeniaeformis TTAC_0000009401 I 0.731
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.729
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.712
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.712
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.701
Sjc_0015600 Schistosoma japonicum Sjc_0015600 I 0.701