CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_76708
(
Hordeum vulgare
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
MLOC_76708
T179723_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_76708.1
FAR1
17
105
EFYNIYAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKESKSPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLAT
MLOC_76708.1
FAR1
146
234
EFYSMYAGKIGFNVRRASMTVNAENIITRRMFVCSKEGFREKKRGTNRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGLGA
MLOC_76708.2
FAR1
17
105
EFYNIYAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKESKSPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLAT
MLOC_76708.2
FAR1
146
234
EFYSMYAGKIGFNVRRASMTVNAENIITRRMFVCSKEGFREKKRGTNRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGLGA
MLOC_76708.3
FAR1
118
206
EFYNIYAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKESKSPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLAT
MLOC_76708.3
FAR1
247
335
EFYSMYAGKIGFNVRRASMTVNAENIITRRMFVCSKEGFREKKRGTNRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGLGA
MLOC_76708.4
FAR1
17
105
EFYNIYAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKESKSPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLAT
MLOC_76708.4
FAR1
146
234
EFYSMYAGKIGFNVRRASMTVNAENIITRRMFVCSKEGFREKKRGTNRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGLGA
MLOC_76708.5
FAR1
17
105
EFYNIYAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKESKSPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLAT
MLOC_76708.5
FAR1
146
234
EFYSMYAGKIGFNVRRASMTVNAENIITRRMFVCSKEGFREKKRGTNRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGLGA
MLOC_76708.6
FAR1
118
206
EFYNIYAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKESKSPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLAT
MLOC_76708.6
FAR1
247
335
EFYSMYAGKIGFNVRRASMTVNAENIITRRMFVCSKEGFREKKRGTNRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGLGA
Links
Other
FAR1
family TFs
Other
Hordeum vulgare
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2DS_7FB19CC37
Triticum aestivum
Traes_2DS_7FB19CC37
N
0.983
Traes_2AS_70DFD1AE1
Triticum aestivum
Traes_2AS_70DFD1AE1
N
0.978
TRIUR3_28019
Triticum urartu
TRIUR3_28019
N
0.978
Traes_2BL_E5C380F21
Triticum aestivum
Traes_2BL_E5C380F21
N
0.966
Pavir.Bb03075
Panicum virgatum
Pavir.Bb03075
N
0.927
Pavir.J13372
Panicum virgatum
Pavir.J13372
N
0.927
BGIOSGA025948
Oryza indica
BGIOSGA025948
N
0.910
BRADI1G24700
Brachypodium distachyon
BRADI1G24700
N
0.910
GRMZM2G129311
Zea mays
GRMZM2G129311
N
0.910
ORGLA07G0152100
Oryza glaberrima
ORGLA07G0152100
N
0.910
OS07G0563600
Oryza sativa
OS07G0563600
N
0.910
Sb02g036450
Sorghum bicolor
Sb02g036450
N
0.910
PDK_20s1367571g003
Phoenix dactylifera
PDK_20s1367571g003
N
0.848