Pavir.J13372 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.J13372 T181815_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J13372.1.p FAR1 116 204
Pavir.J13372.1.p FAR1 245 333
Pavir.J13372.2.p FAR1 100 188
Pavir.J13372.2.p FAR1 229 317
Pavir.J13372.3.p FAR1 100 188
Pavir.J13372.3.p FAR1 229 317
Pavir.J13372.4.p FAR1 116 204
Pavir.J13372.4.p FAR1 245 333

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Bb03075 Panicum virgatum Pavir.Bb03075 N 0.989
Sb02g036450 Sorghum bicolor Sb02g036450 N 0.978
GRMZM2G129311 Zea mays GRMZM2G129311 N 0.972
Traes_2DS_7FB19CC37 Triticum aestivum Traes_2DS_7FB19CC37 N 0.938
Traes_2AS_70DFD1AE1 Triticum aestivum Traes_2AS_70DFD1AE1 N 0.933
TRIUR3_28019 Triticum urartu TRIUR3_28019 N 0.933
BGIOSGA025948 Oryza indica BGIOSGA025948 N 0.927
MLOC_76708 Hordeum vulgare MLOC_76708 N 0.927
ORGLA07G0152100 Oryza glaberrima ORGLA07G0152100 N 0.927
OS07G0563600 Oryza sativa OS07G0563600 N 0.927
BRADI1G24700 Brachypodium distachyon BRADI1G24700 N 0.921
Traes_2BL_E5C380F21 Triticum aestivum Traes_2BL_E5C380F21 N 0.921
PDK_20s1367571g003 Phoenix dactylifera PDK_20s1367571g003 N 0.854