CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm019586
(
Prunus mume
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pm019586
T180996_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm019586
FAR1
64
150
TFYKAYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRPNGNWYVYSFVKEHNHELLP
Links
Other
FAR1
family TFs
Other
Prunus mume
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa001996mg
Prunus persica
PRUPE_ppa001996mg
N
1.000
MDP0000267783
Malus domestica
MDP0000267783
N
0.989
gene12562-v1.0-hybrid
Fragaria vesca
gene12562-v1.0-hybrid
N
0.966
MDP0000264383
Malus domestica
MDP0000264383
N
0.966
Ca_02661
Cicer arietinum
Ca_02661
N
0.943
GLYMA13G41660
Glycine max
GLYMA13G41660
N
0.931
GLYMA15G03750
Glycine max
GLYMA15G03750
N
0.931
POPTR_0003s22300
Populus trichocarpa
POPTR_0003s22300
N
0.931
FRS4
Vitis vinifera
VIT_09s0054g01830
N
0.931
cassava38027.valid.m1
Manihot esculenta
cassava38027.valid.m1
N
0.931
SapurV1A.0009s0410
Salix purpurea
SapurV1A.0009s0410
N
0.931
Thhalv10018262m.g
Eutrema salsugineum
Thhalv10018262m.g
N
0.931
FRS4
Arabidopsis thaliana
AT1G76320
N
0.920
Bostr.20129s0070
Boechera stricta
Bostr.20129s0070
N
0.920
Cagra.0799s0103
Capsella grandiflora
Cagra.0799s0103
N
0.920
Carubv10019871m.g
Capsella rubella
Carubv10019871m.g
N
0.920
PK07805.1
Cannabis sativa
PK07805.1
N
0.920
Bo6g120360
Brassica oleracea
Bo6g120360
N
0.908
TCM_040565
Theobroma cacao
TCM_040565
N
0.897
mgf008660m
Mimulus guttatus
mgf008660m
N
0.897
Eucgr.B03670
Eucalyptus grandis
Eucgr.B03670
N
0.897
Gorai.009G072000
Gossypium raimondii
Gorai.009G072000
N
0.897
Cucsa.048930
Cucumis sativus
Cucsa.048930
N
0.874
Solyc03g121630.2
Solanum lycopersicum
Solyc03g121630.2
N
0.862
TCM_013043
Theobroma cacao
TCM_013043
I
0.846
SapurV1A.0767s0100
Salix purpurea
SapurV1A.0767s0100
I
0.808