CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.100320
(
Cucumis sativus
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Cucsa.100320
T181075_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.100320.1
FAR1
55
135
FTPYVGQIFKSDDDAFERDIVCYRSGYNQPRKKVNVEHPRERKSVRCGCDAKLYLTKEIVDGVSQWYVSQFSNVHNHELLE
Links
Other
FAR1
family TFs
Other
Cucumis sativus
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002284mg
Prunus persica
PRUPE_ppa002284mg
N
0.753
gene15606-v1.0-hybrid
Fragaria vesca
gene15606-v1.0-hybrid
N
0.753
Thhalv10003748m.g
Eutrema salsugineum
Thhalv10003748m.g
N
0.753
TCM_020251
Theobroma cacao
TCM_020251
N
0.740
FRS10
Vitis vinifera
VIT_12s0057g00960
N
0.740
Ciclev10014481m.g
Citrus clementina
Ciclev10014481m.g
N
0.740
orange1.1g005579m.g
Citrus sinensis
orange1.1g005579m.g
N
0.740
FRS10
Arabidopsis thaliana
AT5G28530
N
0.727
28859.m000324
Ricinus communis
28859.m000324
N
0.727
Cagra.13833s0001
Capsella grandiflora
Cagra.13833s0001
N
0.727
Carubv10000250m.g
Capsella rubella
Carubv10000250m.g
N
0.727
Gorai.005G129200
Gossypium raimondii
Gorai.005G129200
N
0.727
FRS10
Populus trichocarpa
POPTR_0014s16500
N
0.714
SapurV1A.0054s0360
Salix purpurea
SapurV1A.0054s0360
N
0.714