CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00002p00254680
(
Amborella trichopoda
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AMTR_s00002p00254680
T191670_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN01310
GATA
1
19
MVQSLCNACGIRHRKARRA
Links
Other
GATA
family TFs
Other
Amborella trichopoda
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr2G15750_001
Musa acuminata
GSMUA_Achr2G15750_001
N
0.842
Traes_4AL_4108A9D5E
Triticum aestivum
Traes_4AL_4108A9D5E
N
0.827
TRIUR3_07191
Triticum urartu
TRIUR3_07191
N
0.827
Pavir.J34225
Panicum virgatum
Pavir.J34225
N
0.827
MLOC_62522
Hordeum vulgare
MLOC_62522
I
0.825
Cagra.12434s0001
Capsella grandiflora
Cagra.12434s0001
I
0.825
GRMZM5G887975
Zea mays
GRMZM5G887975
N
0.814