CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE26488
(
Caenorhabditis remanei
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CRE26488
T192404_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
egl-27
M08205_2.00
Caenorhabditis elegans
YTGATAAG
CTTATCAR
ChIP-seq
Contrino et al.(2012)
Mw142
0.987
0.987
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE26488
GATA
439
472
CHHCYGAESKDWHHANGLLLCTDCRLHYKKYGQL
Links
Other
GATA
family TFs
Other
Caenorhabditis remanei
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
egl-27
Caenorhabditis elegans
WBGene00001194
D
0.987
CJA22427
Caenorhabditis japonica
CJA22427
I
0.975
CBN30908
Caenorhabditis brenneri
CBN30908
I
0.944