Cla020871 (Citrullus lanatus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cla020871 T195884_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.461 1.000
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.461 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla020871 GATA 1 20

Links

Other GATA family TFs
Other Citrullus lanatus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000243535 Malus domestica MDP0000243535 I 0.867
LPERR05G19030 Leersia perrieri LPERR05G19030 I 0.867
Ciclev10032018m.g Citrus clementina Ciclev10032018m.g I 0.461
Eucgr.G02840 Eucalyptus grandis Eucgr.G02840 I 0.461
Carubv10017647m.g Capsella rubella Carubv10017647m.g I 0.461
Cagra.1742s0041 Capsella grandiflora Cagra.1742s0041 I 0.461
Bostr.0697s0095 Boechera stricta Bostr.0697s0095 I 0.461
evm.TU.supercontig_546.1 Carica papaya evm.TU.supercontig_546.1 I 0.461
Gorai.009G313700 Gossypium raimondii Gorai.009G313700 I 0.461
orange1.1g016706m.g Citrus sinensis orange1.1g016706m.g I 0.461
SapurV1A.0518s0130 Salix purpurea SapurV1A.0518s0130 I 0.461
Thhalv10010544m.g Eutrema salsugineum Thhalv10010544m.g I 0.461
Gorai.011G238800 Gossypium raimondii Gorai.011G238800 I 0.461
Cucsa.308400 Cucumis sativus Cucsa.308400 I 0.461
SapurV1A.0657s0040 Salix purpurea SapurV1A.0657s0040 I 0.461
27494.m000044 Ricinus communis 27494.m000044 I 0.461
GLYMA10G35470 Glycine max GLYMA10G35470 I 0.461
GLYMA20G32050 Glycine max GLYMA20G32050 I 0.461
BME3-ZF Arabidopsis lyrata fgenesh2_kg.5__1883__AT3G54810.2 I 0.461
Bra007099 Brassica rapa Bra007099 I 0.461
Bo4g118340 Brassica oleracea Bo4g118340 I 0.461
Bo8g085930 Brassica oleracea Bo8g085930 I 0.461
MTR_1g094930 Medicago truncatula MTR_1g094930 I 0.461
POPTR_0008s03880 Populus trichocarpa POPTR_0008s03880 I 0.461
Ca_08487 Cicer arietinum Ca_08487 I 0.461
GATA8 Arabidopsis thaliana AT3G54810 D 0.461
BME3-ZF Vitis vinifera VIT_13s0019g04390 I 0.461
TCM_043158 Theobroma cacao TCM_043158 I 0.461
POPTR_0010s23010 Populus trichocarpa POPTR_0010s23010 I 0.461
cassava37880.valid.m1 Manihot esculenta cassava37880.valid.m1 I 0.461