CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.121.107.1
(
Physcomitrella patens
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
e_gw1.121.107.1
T196072_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.121.107.1
GATA
12
47
CAHCGTSKTPLWRNGPQGPKSLCNACGIRFKKAGRR
Links
Other
GATA
family TFs
Other
Physcomitrella patens
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.167.135.1
Physcomitrella patens
e_gw1.167.135.1
N
0.856
estExt_fgenesh1_pg.C_1210016
Physcomitrella patens
estExt_fgenesh1_pg.C_1210016
N
0.856
fgenesh1_pg.scaffold_3000165
Physcomitrella patens
fgenesh1_pg.scaffold_3000165
N
0.856
SELMODRAFT_440037
Selaginella moellendorffii
SELMODRAFT_440037
N
0.836
SELMODRAFT_444966
Selaginella moellendorffii
SELMODRAFT_444966
N
0.836
SELMODRAFT_415035
Selaginella moellendorffii
SELMODRAFT_415035
N
0.829
SELMODRAFT_405209
Selaginella moellendorffii
SELMODRAFT_405209
N
0.829
GSMUA_Achr8G24880_001
Musa acuminata
GSMUA_Achr8G24880_001
N
0.802
Cucsa.353330
Cucumis sativus
Cucsa.353330
N
0.802
Cla021191
Citrullus lanatus
Cla021191
N
0.802
cassava32152.m1
Manihot esculenta
cassava32152.m1
N
0.802
AMTR_s00064p00107710
Amborella trichopoda
AMTR_s00064p00107710
N
0.802