CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.167.135.1
(
Physcomitrella patens
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
e_gw1.167.135.1
T196073_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.167.135.1
GATA
46
81
CAHCGTSKTPLWRNGPGGPKSLCNACGIRFKKAGRR
Links
Other
GATA
family TFs
Other
Physcomitrella patens
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_1210016
Physcomitrella patens
estExt_fgenesh1_pg.C_1210016
N
0.867
fgenesh1_pg.scaffold_3000165
Physcomitrella patens
fgenesh1_pg.scaffold_3000165
N
0.867
e_gw1.121.107.1
Physcomitrella patens
e_gw1.121.107.1
N
0.856
SELMODRAFT_440037
Selaginella moellendorffii
SELMODRAFT_440037
N
0.836
SELMODRAFT_444966
Selaginella moellendorffii
SELMODRAFT_444966
N
0.836
SELMODRAFT_405209
Selaginella moellendorffii
SELMODRAFT_405209
N
0.829
SELMODRAFT_415035
Selaginella moellendorffii
SELMODRAFT_415035
N
0.829