fgenesh1_pg.C_chr_6.1000068 (Pichia stipitis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 fgenesh1_pg.C_chr_6.1000068 T196198_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gtaI
M02012_2.00 		Dictyostelium discoideum
VMGATCKV
BMGATCKB		 PBM
Weirauch et al.(2014)
pTH5406 		0.832 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_chr_6.1000068 GATA 301 336

Links

Other GATA family TFs
Other Pichia stipitis TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PICST_32587 Scheffersomyces stipitis PICST_32587 I 0.867
SAKL0A06842g Lachancea kluyveri SAKL0A06842g I 0.850
KLTH0H06314g Lachancea thermotolerans KLTH0H06314g I 0.837
KLTH0H06314g Kluyveromyces thermotolerans KLTH0H06314g I 0.837
Kwal_1746 Kluyveromyces waltii Kwal_1746 I 0.836
gtaI Dictyostelium discoideum DDB_G0281661 D 0.832
LALA0_S07e00188g Lachancea lanzarotensis LALA0_S07e00188g I 0.832
estExt_Genewise1Plus.C_1210006 Dictyostelium purpureum estExt_Genewise1Plus.C_1210006 I 0.832
KNAG_0E02120 Kazachstania naganishii KNAG_0E02120 I 0.831
Kpol_385p3 Vanderwaltozyma polyspora Kpol_385p3 I 0.831
KAFR_0F02680 Kazachstania africana KAFR_0F02680 I 0.819
BN7_337 Wickerhamomyces ciferrii BN7_337 N 0.806
EFA75635.1 Polysphondylium pallidum EFA75635.1 I 0.806