CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SAKL0A06842g
(
Lachancea kluyveri
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
SAKL0A06842g
T197227_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaI
M02012_2.00
Dictyostelium discoideum
VMGATCKV
BMGATCKB
PBM
Weirauch et al.(2014)
pTH5406
0.831
0.657
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SAKL0A06842g
GATA
383
417
CLHCASMETPEWRRGPYGKRSLCNACGLFYKKLIN
Links
Other
GATA
family TFs
Other
Lachancea kluyveri
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_32587
Scheffersomyces stipitis
PICST_32587
I
0.850
fgenesh1_pg.C_chr_6.1000068
Pichia stipitis
fgenesh1_pg.C_chr_6.1000068
I
0.850
Kwal_1746
Kluyveromyces waltii
Kwal_1746
I
0.847
KNAG_0E02120
Kazachstania naganishii
KNAG_0E02120
I
0.843
LALA0_S07e00188g
Lachancea lanzarotensis
LALA0_S07e00188g
I
0.842
KLTH0H06314g
Lachancea thermotolerans
KLTH0H06314g
I
0.836
KLTH0H06314g
Kluyveromyces thermotolerans
KLTH0H06314g
I
0.836
gtaI
Dictyostelium discoideum
DDB_G0281661
D
0.831
Kpol_385p3
Vanderwaltozyma polyspora
Kpol_385p3
I
0.831
estExt_Genewise1Plus.C_1210006
Dictyostelium purpureum
estExt_Genewise1Plus.C_1210006
I
0.831
KAFR_0F02680
Kazachstania africana
KAFR_0F02680
I
0.828
BN7_337
Wickerhamomyces ciferrii
BN7_337
N
0.816
EFA75635.1
Polysphondylium pallidum
EFA75635.1
I
0.805