CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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est_cluster_kg.Chr_02__68__3202028:1
(
Micromonas sp RCC299
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
est_cluster_kg.Chr_02__68__3202028:1
T196500_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
107704
GATA
391
424
CLNCGQQKTPQWRMGPEGPKTLCNACGVRFRKGL
Links
Other
GATA
family TFs
Other
Micromonas sp RCC299
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_scaffold_4000277
Micromonas pusilla
fgenesh1_pg.C_scaffold_4000277
N
0.848
CHLREDRAFT_205871
Chlamydomonas reinhardtii
CHLREDRAFT_205871
N
0.828
e_gw1.7.793.1
Ostreococcus RCC809
e_gw1.7.793.1
N
0.825
estExt_fgenesh1_pg.C_Chr_07.00010219
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_07.00010219
N
0.825
OSTLU_32750
Ostreococcus lucimarinus
OSTLU_32750
N
0.812