CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_Chr_07.00010219
(
Ostreococcus tauri
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_fgenesh1_pg.C_Chr_07.00010219
T197060_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_Chr_07.00010219
GATA
312
346
CLHCGTVKTPQWRMGPEGKKTLCNACGVRFMKGIL
Links
Other
GATA
family TFs
Other
Ostreococcus tauri
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.7.793.1
Ostreococcus RCC809
e_gw1.7.793.1
N
0.867
OSTLU_32750
Ostreococcus lucimarinus
OSTLU_32750
N
0.853
est_cluster_kg.Chr_02__68__3202028:1
Micromonas sp RCC299
est_cluster_kg.Chr_02__68__3202028:1
N
0.825
PGSC0003DMG400027264
Solanum tuberosum
PGSC0003DMG400027264
N
0.817
Solyc04g015360.2
Solanum lycopersicum
Solyc04g015360.2
N
0.817
fgenesh1_pg.C_scaffold_4000277
Micromonas pusilla
fgenesh1_pg.C_scaffold_4000277
N
0.812