CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00012p00140480
(
Amborella trichopoda
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AMTR_s00012p00140480
T199774_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN07789
GRAS
1
196
MQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDHLQQVSWKLGQLADTLRLEFESRGFVARSLADLEANMLDVTPSEVVAVNSIFELHKLLAQTGALDKVLARVRALQPQIVTIVEQDANHNRLVFVDRFAEALHYYSSLFDSLERCGLPPGSRDQVMSEVYLGRQIFDIVACEGADRVERHEPLTQWTARMGSR
Links
Other
GRAS
family TFs
Other
Amborella trichopoda
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.730
Pm014329
Prunus mume
Pm014329
I
0.724
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.719
MDP0000237978
Malus domestica
MDP0000237978
N
0.709
VIT_14s0006g00640
Vitis vinifera
VIT_14s0006g00640
I
0.704
28677.m000055
Ricinus communis
28677.m000055
N
0.704