CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL16
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT5G67411
T199847_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G67411.1
GRAS
1
202
MQIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLEPKSR
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.C_scaffold_8002175
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002175
N
0.942
Bostr.0568s0167
Boechera stricta
Bostr.0568s0167
N
0.915
Carubv10028176m.g
Capsella rubella
Carubv10028176m.g
N
0.868
Bo7g063640
Brassica oleracea
Bo7g063640
N
0.841
fgenesh1_pg.C_scaffold_5001499
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5001499
N
0.720
Bostr.6864s0245
Boechera stricta
Bostr.6864s0245
N
0.714
Thhalv10010981m.g
Eutrema salsugineum
Thhalv10010981m.g
N
0.714