CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10010981m.g
(
Eutrema salsugineum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Thhalv10010981m.g
T203198_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10010981m
GRAS
33
414
MEQLLLHCATAIDSNDAALSHQILWVLNNIAPQDGDSSTKRLTSAFVRALLSRAVTKSPTLFSTVFQPPATELHRFSVVELAGFVDLTPWHRFGYIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASKLNKPPLLKLTVVSSSTFPPFINVSYEELGSKLVNFATTRNIEMEFSIIPSTHSDGFSSLLQQLRIYPFSFNEALVVNCHMMLRYIPDETLTPSSSSLSLRNIFLKQLRSLNPTIVTLIEEDADLTSEDLVSRLRSAFNYFWIPFDTTDTFVSEKRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEEAVADLKAMLEEHGVGWGMKKDDDDESLVLTWKGHSVVFATVWV
Links
Other
GRAS
family TFs
Other
Eutrema salsugineum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra036041
Brassica rapa
Bra036041
N
0.865
SCL32
Arabidopsis thaliana
AT3G49950
N
0.851
Bo8g079250
Brassica oleracea
Bo8g079250
N
0.851
Cagra.25155s0006
Capsella grandiflora
Cagra.25155s0006
N
0.840
Carubv10017361m.g
Capsella rubella
Carubv10017361m.g
N
0.840
fgenesh1_pg.C_scaffold_5001499
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5001499
N
0.833
Bostr.6864s0245
Boechera stricta
Bostr.6864s0245
N
0.832
Traes_2AS_E17243D52
Triticum aestivum
Traes_2AS_E17243D52
N
0.721
SCL16
Arabidopsis thaliana
AT5G67411
N
0.714
fgenesh1_pm.C_scaffold_8002175
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002175
N
0.707
Thhalv10005469m.g
Eutrema salsugineum
Thhalv10005469m.g
N
0.701