CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra038002
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra038002
T200013_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra038002.1-P
GRAS
42
443
LRRLLFTAADFISQSNVSAAQNILSILSSNSSPYGDSTERLVHLFTKALSVRIGLSENAATWTANEMASSSTVFTSSVCKEQFLFRTKNNNNSDLESCYYLWLNQLTPFIRFSHLTANQAILDATETNNGNGALHILDLDISQGLQWPPLMQALAERSSSNPSSTPPPSLRITGCGRDVTVLNRTGDRLTRFANSLGLQFQFHTLVIAEEDLAGLLLQIRLLALSAVQGESIAVNCVHFLHRFFNDDGDMIGHFLSAIKSLNPRIVTMAEREANHGDPSFLNRFSEALDHFMAIFDSLEATLPPNSRERLTLEQRWFGMEILDVVAAEAAERKQRHRRFEVWEEMMKRHGFANVPIGSFAFSQAKLLLRLHYPSEGYNLQFLNDSLFLGWKNRLLFSVSSWK
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo6g034670
Brassica oleracea
Bo6g034670
N
0.972
SCL18
Arabidopsis thaliana
AT1G55580
N
0.884
Thhalv10011480m.g
Eutrema salsugineum
Thhalv10011480m.g
N
0.883
Bostr.6758s0017
Boechera stricta
Bostr.6758s0017
N
0.872
Cagra.0001s0019
Capsella grandiflora
Cagra.0001s0019
N
0.850
Carubv10011270m.g
Capsella rubella
Carubv10011270m.g
N
0.850
LAS
Arabidopsis lyrata
scaffold_105352.1
N
0.839