CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA01G45910
(
Oryza nivara
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ONIVA01G45910
T200827_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA01G45910.1
GRAS
8
61
SSYQPSWPPAQATVDVVGSVETPARRAFQRVASFFVQELLDRRASAGAGPCEHG
ONIVA01G45910.1
GRAS
70
274
REAYAEGLGMYLEFRGINRGLESLHIDDLGVDADEAVAINSVLELHSVVKESRGALNSVLQTIRKLSPRAFVLVEQDAGHNGPFFLGRFMEALHYYAALFDALDAALPRYDARRERVEQFHFGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSVPIKMAAKAREWLDENAGGDGYTVADEKVCLVLGWKGKPVIAASCWK
Links
Other
GRAS
family TFs
Other
Oryza nivara
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005001
Oryza indica
BGIOSGA005001
N
1.000
ORGLA01G0348000
Oryza glaberrima
ORGLA01G0348000
N
0.864
BGIOSGA004999
Oryza indica
BGIOSGA004999
N
0.777
OBART01G40830
Oryza barthii
OBART01G40830
N
0.773
OGLUM01G45030
Oryza glumaepatula
OGLUM01G45030
N
0.773
OMERI01G37870
Oryza meridionalis
OMERI01G37870
N
0.773
ORGLA01G0347800
Oryza glaberrima
ORGLA01G0347800
N
0.773
Pavir.J09064
Panicum virgatum
Pavir.J09064
N
0.730
BRADI2G57940
Brachypodium distachyon
BRADI2G57940
N
0.727
GRMZM2G013016
Zea mays
GRMZM2G013016
N
0.719
TRAES3BF071100020CFD_g
Triticum aestivum
TRAES3BF071100020CFD_g
N
0.719
TRAES3BF071100040CFD_g
Triticum aestivum
TRAES3BF071100040CFD_g
N
0.719
Sb03g043030
Sorghum bicolor
Sb03g043030
N
0.715
Si000959m.g
Setaria italica
Si000959m.g
N
0.715