CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA01G0348000
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA01G0348000
T200937_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA01G0348000.1
GRAS
8
62
SSYQPSWPPAQATVDVVGSVETPARRAFQRVASFFVQELLDRRASTGAGPCEHGV
ORGLA01G0348000.1
GRAS
71
275
EAYAEGLGMMYLEFRAVDRSLESLHIEDLGIDADEAVAINSVLELHPVVKENRGALNSVLQTIRMLSPRAFVLVEQDAGHNGPFFLGRFMEALQYYAALFDALDAELPRYGARRARVEQFHFGTEIRNVVGWEGAARVERHERADQWRRRMSRAGFQSVPTKMAAKAREWLVENAGGDGYTVAEEKGCLVLGWKGKPVIAASCWK
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005001
Oryza indica
BGIOSGA005001
N
0.864
ONIVA01G45910
Oryza nivara
ONIVA01G45910
N
0.864
OBART01G40850
Oryza barthii
OBART01G40850
N
0.794