CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc04g014830.1
(
Solanum lycopersicum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Solyc04g014830.1
T201559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc04g014830.1.1
GRAS
174
544
LKELLVACAEAVDEADTSTAEVLMDALEKRVSVYGEPMQRLSAYMLEGLRARLLSSGSNIYKKLKCNEPTSSELLSYMQVLYHITPYFKFAYMSANVVISEAMKNENRIHIIDFQIAQGSQWVFLIHYLARRPGGPPFLRITGIDDSQSAHARGGGLQLVGERLASIAKSCGVPFEFHTAALSGCMVKLENLRVRHGESLAVNFPYMLHHMPDESVSTMNHRDRLLRLVKSLSPKIVALVEQEMNTNTAPFLPRFRETLDYHKAIFESVDVTRPRNDMQRIRSEEHCIARDVVNLIACEGADRVERHEVFGKWRSRLLMAGFTPCPLSPSVAEAIKVMLKEYSSNYKLAESQGALYIGWNNRALATSSAWQ
Links
Other
GRAS
family TFs
Other
Solanum lycopersicum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400023556
Solanum tuberosum
PGSC0003DMG400023556
N
0.981
PGSC0003DMG400013356
Solanum tuberosum
PGSC0003DMG400013356
N
0.816
Solyc11g012510.1
Solanum lycopersicum
Solyc11g012510.1
N
0.808
mgf007403m
Mimulus guttatus
mgf007403m
N
0.740
PGSC0003DMG400008442
Solanum tuberosum
PGSC0003DMG400008442
N
0.737
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.732
SCL13
Arabidopsis lyrata
fgenesh2_kg.7__2586__AT4G17230.1
N
0.707