CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla014166
(
Citrullus lanatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cla014166
T201925_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla014166
GRAS
84
468
LYHLLVAAADAVFGDHECRDLAHVILIRLNELVSPSHGTNLERLTAYYAQAFQDLLDCAPLNKPHHHNHHLHRDHDHSPTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVAEDRRVHIVDYDIMEGIQWASLMQALVSRKDSPSAPHLRITAVSRGASGRRSIATVQETGRRLVAFAASIGQPFSFHQCKLDSDESFRPSGLKLVRGEALVVNCMLHLPHFSYRTSESIASFLSGAKILNPRIVTLVEEEIGHGPTIDGDYKVQFLDSLERYSAIYDSLEAVIPMKNRARTLVERVFLGPRISATLRRIGQRRRSTVTMEDNCLWGEQLEKMGLKAATISFANHCQARLLLGLFNDGYKVEELGNNKLVLGWKSKRLFSASIWV
Links
Other
GRAS
family TFs
Other
Citrullus lanatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.365230
Cucumis sativus
Cucsa.365230
N
0.886
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.714
Gorai.010G048800
Gossypium raimondii
Gorai.010G048800
N
0.712
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.703
TCM_035069
Theobroma cacao
TCM_035069
N
0.700