CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.365230
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.365230
T202147_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.365230.1
GRAS
68
450
LYHLLTAAADAVLGDHKSCDLAHVILVRLNELVSPSHGTNLERLTAYYAQAFQDLLDSAPVANKTHHHNHHIHQRDDHTPTDVLAAFQLLQEMSPYVKFGHFTANQAILEAVAEDRRVHIVDYDIMEGIQWASLMQAFVSSPSAPHLRITAISRGANGRRSIGTVQETGRRLVAFAASIGQPFSFHQCKLDSDESFRPSGLKLVKGEALVVNCMLHLPHFSYRSPESIASFLSGAKSLSPRIVTLVEEEIGHGPTIDGDYKVQFLDSLERYSAIYDSLEAVIPMKNRARALVERVFLGPRISATLRRIGQRRWSTAEMEDNCLWGEKLEKMGLKTVKISFANHCQARLLLGLFNDGYRVEELGNNKLVLGWKSKRLLSVSIWG
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014166
Citrullus lanatus
Cla014166
N
0.886
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.721
Gorai.010G048800
Gossypium raimondii
Gorai.010G048800
N
0.715
TCM_035069
Theobroma cacao
TCM_035069
N
0.707
Pm004863
Prunus mume
Pm004863
N
0.706
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.702