RHOXF1 (Callithrix jacchus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCJAG00000004938 T207914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RHOXF1
M03089_2.00 		Homo sapiens
RGATNAKCY
RGMTNATCY		 SELEX
Jolma et al.(2013)
RHOXF1_1 		0.607 0.768
RHOXF1
M03090_2.00 		Homo sapiens
NTRAKCCN
NGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_2 		0.607 0.768
RHOXF1
M03091_2.00 		Homo sapiens
VGMTHAKCC
GGMTDAKCB		 SELEX
Jolma et al.(2013)
RHOXF1_3 		0.607 0.768
RHOXF1
M03092_2.00 		Homo sapiens
NTRAKCCH
DGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_4 		0.607 0.768
RHOXF1
M04947_2.00 		Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_HT-SELEX 		0.607 0.768
RHOXF1
M04948_2.00 		Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_Methyl-HT-SELEX 		0.607 0.768
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000009006 Homeodomain 118 173
ENSCJAP00000045428 Homeodomain 102 157

Links

Other Homeodomain family TFs
Other Callithrix jacchus TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000018344 Chlorocebus sabaeus ENSCSAG00000018344 I 0.779
ENSMMUG00000013600 Macaca mulatta ENSMMUG00000013600 I 0.779
ENSPANG00000002928 Papio anubis ENSPANG00000002928 I 0.779
ENSMMUP00000017877 Macaca fascicularis ENSMMUP00000017877 I 0.779
RHOXF1 Gorilla gorilla ENSGGOG00000016112 I 0.640
ENSPPYG00000020680 Pongo abelii ENSPPYG00000020680 I 0.640
RHOXF1 Homo sapiens ENSG00000101883 D 0.607
ENSSSCG00000012611 Sus scrofa ENSSSCG00000012611 N 0.607