ENSLAFG00000028670 (Loxodonta africana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLAFG00000028670 T211093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gsx2
M00469_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Gsh2_3990 		0.600 0.946
GSX2
M03227_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
GSX2_1 		0.600 0.946
GSX2
M05329_2.00 		Homo sapiens
HTAATKRS
SYMATTAD		 SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX 		0.600 0.946
GSX2
M05330_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX 		0.600 0.946
GSX1
M03205_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
GSX1_1 		0.599 0.929
GSX1
M05271_2.00 		Homo sapiens
NYMATNRN
NYNATKRN		 SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX 		0.599 0.929
GSX1
M05272_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX 		0.599 0.929
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000021789 Homeodomain 14 69

Links

Other Homeodomain family TFs
Other Loxodonta africana TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARGFX Oryctolagus cuniculus ENSOCUG00000008795 I 0.613
Smp_171380 Schistosoma mansoni Smp_171380 I 0.609
PXEA_0000230101 Protopolystoma xenopodis PXEA_0000230101 I 0.609
SMTD_0002261301 Schistosoma mattheei SMTD_0002261301 I 0.609
SROB_0002221601 Schistosoma rodhaini SROB_0002221601 I 0.609
TRE_0001559401 Trichobilharzia regenti TRE_0001559401 I 0.609
CGOC_0000645001 Cylicostephanus goldi CGOC_0000645001 I 0.604
EEL_0000436201 Elaeophora elaphi EEL_0000436201 I 0.604
TELCIR_21719 Teladorsagia circumcincta TELCIR_21719 I 0.604
Sakowv30037715m.g Saccoglossus kowalevskii Sakowv30037715m.g N 0.601
Sakowv30037716m.g Saccoglossus kowalevskii Sakowv30037716m.g N 0.601
GSX2 Anolis carolinensis ENSACAG00000010497 I 0.600
ENSAMEG00000018350 Ailuropoda melanoleuca ENSAMEG00000018350 I 0.600
ENSAMXG00000002611 Astyanax mexicanus ENSAMXG00000002611 I 0.600
GSX2 Bos taurus ENSBTAG00000045812 I 0.600
GSX2 Canis familiaris ENSCAFG00000002052 I 0.600
GSX2 Callithrix jacchus ENSCJAG00000018454 I 0.600
GSX2 Cavia porcellus ENSCPOG00000005837 I 0.600
ENSCSAG00000004981 Chlorocebus sabaeus ENSCSAG00000004981 I 0.600
gsx2 Danio rerio ENSDARG00000043322 I 0.600
GSX2 Dasypus novemcinctus ENSDNOG00000045933 I 0.600
Gsx2 Dipodomys ordii ENSDORG00000000416 I 0.600
GSX2 Equus caballus ENSECAG00000013430 I 0.600
GSX2 Erinaceus europaeus ENSEEUG00000004576 I 0.600
ENSFALG00000003404 Ficedula albicollis ENSFALG00000003404 I 0.600
GSX2 Felis catus ENSFCAG00000025271 I 0.600
GSX2 Homo sapiens ENSG00000180613 D 0.600
GSX2 Gorilla gorilla ENSGGOG00000007928 I 0.600
ENSLACG00000007818 Latimeria chalumnae ENSLACG00000007818 I 0.600
ENSLOCG00000004253 Lepisosteus oculatus ENSLOCG00000004253 I 0.600
ENSMEUG00000016549 Macropus eugenii ENSMEUG00000016549 I 0.600
GSX2 Myotis lucifugus ENSMLUG00000006733 I 0.600
ENSMMUG00000006384 Macaca mulatta ENSMMUG00000006384 I 0.600
GSX2 Monodelphis domestica ENSMODG00000020668 I 0.600
ENSMPUG00000005814 Mustela putorius furo ENSMPUG00000005814 I 0.600
Gsx2 Mus musculus ENSMUSG00000035946 D 0.600
ENSNLEG00000008278 Nomascus leucogenys ENSNLEG00000008278 I 0.600
ENSOANG00000009063 Ornithorhynchus anatinus ENSOANG00000009063 I 0.600
ENSOARG00000018997 Ovis aries ENSOARG00000018997 I 0.600
GSX2 Oryctolagus cuniculus ENSOCUG00000004209 I 0.600
GSX2 Otolemur garnettii ENSOGAG00000015271 I 0.600
ENSPANG00000021441 Papio anubis ENSPANG00000021441 I 0.600
ENSPPYG00000014769 Pongo abelii ENSPPYG00000014769 I 0.600
ENSPSIG00000006477 Pelodiscus sinensis ENSPSIG00000006477 I 0.600
GSX2 Pan troglodytes ENSPTRG00000016065 I 0.600
GSX2 Pteropus vampyrus ENSPVAG00000003564 I 0.600
Gsx2 Rattus norvegicus ENSRNOG00000002266 I 0.600
ENSSHAG00000013809 Sarcophilus harrisii ENSSHAG00000013809 I 0.600
GSX2 Sus scrofa ENSSSCG00000008840 I 0.600
ENSSTOG00000023286 Ictidomys tridecemlineatus ENSSTOG00000023286 I 0.600
GSX2 Tupaia belangeri ENSTBEG00000004457 I 0.600
ENSTGUG00000007803 Taeniopygia guttata ENSTGUG00000007803 I 0.600
ENSTGUG00000016803 Taeniopygia guttata ENSTGUG00000016803 I 0.600
GSX2 Tursiops truncatus ENSTTRG00000011491 I 0.600
Alligator_sinensis_CCG003906.1 Alligator sinensis Alligator_sinensis_CCG003906.1 I 0.600
Cmyd_10017743 Chelonia mydas Cmyd_10017743 I 0.600
ENSMMUP00000008418 Macaca fascicularis ENSMMUP00000008418 I 0.600
ENSP00000319118-D1 Bos grunniens ENSP00000319118-D1 I 0.600
Myotis_brandtii_GSX2_10026762 Myotis brandtii Myotis_brandtii_GSX2_10026762 I 0.600
Ogr11807 Ophisaurus gracilis Ogr11807 I 0.600
Pvit_07598 Pogona vitticeps Pvit_07598 I 0.600
ENSAMEG00000015868 Ailuropoda melanoleuca ENSAMEG00000015868 I 0.599
ENSAMXG00000006593 Astyanax mexicanus ENSAMXG00000006593 I 0.599
GSX1 Canis familiaris ENSCAFG00000006749 I 0.599
GSX1 Callithrix jacchus ENSCJAG00000019388 I 0.599
ENSCPOG00000026854 Cavia porcellus ENSCPOG00000026854 I 0.599
ENSCSAG00000017979 Chlorocebus sabaeus ENSCSAG00000017979 I 0.599
gsx1 Danio rerio ENSDARG00000035735 I 0.599
GSX1 Dasypus novemcinctus ENSDNOG00000011821 I 0.599
GSX1 Equus caballus ENSECAG00000000439 I 0.599
ENSFALG00000008593 Ficedula albicollis ENSFALG00000008593 I 0.599
ENSFCAG00000026793 Felis catus ENSFCAG00000026793 I 0.599
GSX1 Homo sapiens ENSG00000169840 D 0.599
GSX1 Gasterosteus aculeatus ENSGACG00000020684 I 0.599
GSX1 Gorilla gorilla ENSGGOG00000005011 I 0.599
ENSGMOG00000002543 Gadus morhua ENSGMOG00000002543 I 0.599
ENSLACG00000016379 Latimeria chalumnae ENSLACG00000016379 I 0.599
ENSMEUG00000008957 Macropus eugenii ENSMEUG00000008957 I 0.599
ENSMMUG00000004507 Macaca mulatta ENSMMUG00000004507 I 0.599
ENSMODG00000009010 Monodelphis domestica ENSMODG00000009010 I 0.599
ENSMPUG00000005153 Mustela putorius furo ENSMPUG00000005153 I 0.599
Gsx1 Mus musculus ENSMUSG00000053129 I 0.599
ENSNLEG00000000360 Nomascus leucogenys ENSNLEG00000000360 I 0.599
GSX1 Oryctolagus cuniculus ENSOCUG00000023424 I 0.599
GSX1 Otolemur garnettii ENSOGAG00000011242 I 0.599
ENSONIG00000005163 Oreochromis niloticus ENSONIG00000005163 I 0.599
ENSPANG00000017129 Papio anubis ENSPANG00000017129 I 0.599
ENSPFOG00000019324 Poecilia formosa ENSPFOG00000019324 I 0.599
ENSPPYG00000005239 Pongo abelii ENSPPYG00000005239 I 0.599
GSX1 Pan troglodytes ENSPTRG00000005735 I 0.599
Gsx1 Rattus norvegicus ENSRNOG00000000952 I 0.599
GSX1 Sorex araneus ENSSARG00000002493 I 0.599
ENSSHAG00000017662 Sarcophilus harrisii ENSSHAG00000017662 I 0.599
GSX1 Sus scrofa ENSSSCG00000009313 I 0.599
ENSSTOG00000029234 Ictidomys tridecemlineatus ENSSTOG00000029234 I 0.599
GSX1 Tupaia belangeri ENSTBEG00000014128 I 0.599
ENSTGUG00000011603 Taeniopygia guttata ENSTGUG00000011603 I 0.599
GSX1 Takifugu rubripes ENSTRUG00000016892 I 0.599
ENSXMAG00000012980 Xiphophorus maculatus ENSXMAG00000012980 I 0.599
Cmyd_10006639 Chelonia mydas Cmyd_10006639 I 0.599
ENSP00000304331 Macaca fascicularis ENSP00000304331 I 0.599
Myotis_brandtii_GSX1_10026422 Myotis brandtii Myotis_brandtii_GSX1_10026422 I 0.599
Ogr19213 Ophisaurus gracilis Ogr19213 I 0.599
Pvit_11743 Pogona vitticeps Pvit_11743 I 0.599
gsx1 Xenopus tropicalis XB-GENE-855502 I 0.599