Obox8 (Mus musculus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMUSG00000099216 T212614_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dharma
M02080_2.00 		Danio rerio
NNRAKCY
RGMTYNN		 PBM
Weirauch et al.(2014)
pTH6530 		0.670 0.421
RHOXF1
M03089_2.00 		Homo sapiens
RGATNAKCY
RGMTNATCY		 SELEX
Jolma et al.(2013)
RHOXF1_1 		0.647 0.404
RHOXF1
M03090_2.00 		Homo sapiens
NTRAKCCN
NGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_2 		0.647 0.404
RHOXF1
M03091_2.00 		Homo sapiens
VGMTHAKCC
GGMTDAKCB		 SELEX
Jolma et al.(2013)
RHOXF1_3 		0.647 0.404
RHOXF1
M03092_2.00 		Homo sapiens
NTRAKCCH
DGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_4 		0.647 0.404
RHOXF1
M04947_2.00 		Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_HT-SELEX 		0.647 0.404
RHOXF1
M04948_2.00 		Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_Methyl-HT-SELEX 		0.647 0.404
Obox6
M00490_2.00 		Mus musculus
NTAATCYNN
NNRGATTAN		 PBM
Berger et al.(2008)
Obox6_3440 		0.610 0.491
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000138898 Homeodomain 122 178

Links

Other Homeodomain family TFs
Other Mus musculus TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dharma Danio rerio ENSDARG00000040955 D 0.670
ENSAMXG00000010364 Astyanax mexicanus ENSAMXG00000010364 I 0.670
dharma Tetraodon nigroviridis ENSTNIG00000000233 I 0.660
ENSPPYG00000020680 Pongo abelii ENSPPYG00000020680 I 0.647
RHOXF1 Gorilla gorilla ENSGGOG00000016112 I 0.647
RHOXF1 Homo sapiens ENSG00000101883 D 0.647
nDi.2.2.2.g05194 Dirofilaria immitis nDi.2.2.2.g05194 I 0.636
SMU15025080 Schmidtea mediterranea SMU15025080 I 0.619
XP_002165604.1 Hydra magnipapillata XP_002165604.1 I 0.614
ENSECAG00000010376 Equus caballus ENSECAG00000010376 I 0.614
CapteG167382 Capitella teleta CapteG167382 I 0.613
Obox6 Mus musculus ENSMUSG00000041583 D 0.610
ENSOPRG00000006684 Ochotona princeps ENSOPRG00000006684 I 0.604
SPU_014461 Strongylocentrotus purpuratus SPU_014461 I 0.604
tetur18g03160 Tetranychus urticae tetur18g03160 I 0.604