bcd (Drosophila pseudoobscura)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0086857 T217594_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bcd
M03779_2.00 		Drosophila melanogaster
NNNTAATCCNN
NNGGATTANNN		 SELEX
Nitta et al.(2015)
bcd_1 		0.867 1.000
bcd
M05872_2.00 		Drosophila melanogaster
HTAATCY
RGATTAD		 SMiLE-seq
Isakova et al.(2017)
Bcd 		0.867 1.000
bcd
M06480_2.00 		Drosophila melanogaster
TAATCC
GGATTA		 B1H
Mathelier et al.(2014)
MA0212.1 		0.867 1.000
bcd
M06219_2.00 		Drosophila melanogaster
BNTAATCC
GGATTANV		 B1H
Zhu et al.(2011)
Bcd_Cell_FBgn0000166 		0.867 1.000
bcd
M06220_2.00 		Drosophila melanogaster
HTAAKCYB
VRGMTTAD		 B1H
Zhu et al.(2011)
bcd_FlyReg_FBgn0000166 		0.867 1.000
bcd
M06221_2.00 		Drosophila melanogaster
YWAAKCY
RGMTTWR		 B1H
Zhu et al.(2011)
bcd_NAR_FBgn0000166 		0.867 1.000
bcd
M06222_2.00 		Drosophila melanogaster
BTAATCY
RGATTAV		 B1H
Zhu et al.(2011)
Bcd_SOLEXA_FBgn0000166 		0.867 1.000
bcd
M09673_2.00 		Drosophila melanogaster
YTAAKCY
RGMTTAR		 Misc
Kulakovskiy et al.(2009)
bcd 		0.867 1.000
bcd
M10782_2.00 		Drosophila melanogaster
HTAATCYS
SRGATTAD		 Transfac
Matys et al.(2006)
I$BCD_01 		0.867 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0284299 Homeodomain 90 146
FBpp0300462 Homeodomain 17 73

Links

Other Homeodomain family TFs
Other Drosophila pseudoobscura TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bcd Drosophila melanogaster FBgn0000166 D 0.867
bcd Drosophila sechellia FBgn0012791 I 0.867
bcd Drosophila simulans FBgn0012864 I 0.867
bcd Drosophila virilis FBgn0013104 I 0.867
GF17793 Drosophila ananassae FBgn0094811 I 0.867
GG10213 Drosophila erecta FBgn0102523 I 0.867
GH19480 Drosophila grimshawi FBgn0126945 I 0.867
GI24718 Drosophila mojavensis FBgn0147440 I 0.867
GK10828 Drosophila willistoni FBgn0212839 I 0.867
GE25828 Drosophila yakuba FBgn0242878 I 0.867
LCUP000252 Lucilia cuprina LCUP000252 I 0.857
MDOA003664 Musca domestica MDOA003664 I 0.855
LEUTX Dasypus novemcinctus ENSDNOG00000024747 I 0.599