CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MDOA003664 *(Musca domestica)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	MDOA003664	T232561_2.00	Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
bcd M03779_2.00	Drosophila melanogaster	NNNTAATCCNN	NNGGATTANNN	SELEX Nitta et al.(2015) bcd_1	0.855	0.912
bcd M05872_2.00	Drosophila melanogaster	HTAATCY	RGATTAD	SMiLE-seq Isakova et al.(2017) Bcd	0.855	0.912
bcd M06480_2.00	Drosophila melanogaster	TAATCC	GGATTA	B1H Mathelier et al.(2014) MA0212.1	0.855	0.912
bcd M06219_2.00	Drosophila melanogaster	BNTAATCC	GGATTANV	B1H Zhu et al.(2011) Bcd_Cell_FBgn0000166	0.855	0.912
bcd M06220_2.00	Drosophila melanogaster	HTAAKCYB	VRGMTTAD	B1H Zhu et al.(2011) bcd_FlyReg_FBgn0000166	0.855	0.912
bcd M06221_2.00	Drosophila melanogaster	YWAAKCY	RGMTTWR	B1H Zhu et al.(2011) bcd_NAR_FBgn0000166	0.855	0.912
bcd M06222_2.00	Drosophila melanogaster	BTAATCY	RGATTAV	B1H Zhu et al.(2011) Bcd_SOLEXA_FBgn0000166	0.855	0.912
bcd M09673_2.00	Drosophila melanogaster	YTAAKCY	RGMTTAR	Misc Kulakovskiy et al.(2009) bcd	0.855	0.912
bcd M10782_2.00	Drosophila melanogaster	HTAATCYS	SRGATTAD	Transfac Matys et al.(2006) I$BCD_01	0.855	0.912
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
MDOA003664-PA	Homeodomain	77	133	RRTRTTFTSAQIAELEQHFLQGRYLTSSRLAELSAKLTLGTAQVKIWFKNRRRRHKI

Links
Other Homeodomain family TFs
Other *Musca domestica* TFs