CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OB12G25330
(
Oryza brachyantha
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
OB12G25330
T221290_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB12G25330.1
Homeodomain
4
60
AAYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ
Links
Other
Homeodomain
family TFs
Other
Oryza brachyantha
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB03G35020
Oryza brachyantha
OB03G35020
N
0.698
OLONG_001916
Oryza longistaminata
OLONG_001916
N
0.669
Eucgr.D00184
Eucalyptus grandis
Eucgr.D00184
I
0.652
SELMODRAFT_167294
Selaginella moellendorffii
SELMODRAFT_167294
I
0.639
SELMODRAFT_77000
Selaginella moellendorffii
SELMODRAFT_77000
I
0.639
mgb000172m
Mimulus guttatus
mgb000172m
N
0.626
TRIUR3_27908
Triticum urartu
TRIUR3_27908
I
0.612