CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf02843-snap-gene-0.9
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
maker-nMf.1.1.scaf02843-snap-gene-0.9
T235032_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf02843-snap-gene-0.9-mRNA-1
Homeodomain
462
487
KARRQSFNILQTTFLEKQFTKQSNIL
maker-nMf.1.1.scaf02843-snap-gene-0.9-mRNA-1
Homeodomain
483
534
QSNILQTTFLEKQFTKQRYINTEQRNKFSAILGLTPQQVKIWYQNRRYKEKI
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TTAC_0001021101
Hydatigera taeniaeformis
TTAC_0001021101
N
0.686
SBAD_0000602401
Soboliphyme baturini
SBAD_0000602401
I
0.648
SROB_0001564301
Schistosoma rodhaini
SROB_0001564301
I
0.637
ACUA026833
Anopheles culicifacies
ACUA026833
I
0.600
AMAM000848
Anopheles maculatus
AMAM000848
I
0.600