PAX2 (Echinops telfairi)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		ENSETEG00000014765 T237329_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX2
M03294_2.00 		Homo sapiens
SGTCACGCWTSRNTGVNY
RNBCANYSAWGCGTGACS		 SELEX
Jolma et al.(2013)
PAX2_1 		0.981 0.981
PAX2
M05428_2.00 		Homo sapiens
NSGYYACGCNYSRNYRVNBN
NVNBYRNYSRNGCGTRRCSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX 		0.981 0.981
PAX2
M10808_2.00 		Homo sapiens
NNHNRTYAHKBRHDMBBNN
NNVVKHDYVMDWRAYNDNN		 Transfac
Matys et al.(2006)
V$PAX2_01 		0.981 0.981
PAX2
M10809_2.00 		Homo sapiens
NDSTTTNNN
NNNAAASHN		 Transfac
Matys et al.(2006)
V$PAX2_02 		0.981 0.981
PAX2
M10810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX2_Q2 		0.981 0.981
PAX2
M05429_2.00 		Homo sapiens
NSGTCACGCWTSANYGVNYN
NRNBCRNTSAWGCGTGACSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX 		0.981 0.981
Pax2
M02690_2.00 		Mus musculus
NRTCAYKB
VMRTGAYN		 SELEX
Mathelier et al.(2014)
MA0067.1 		0.974 0.974
PAX6
M00342_2.00 		Homo sapiens
NNNRCDMATTANNN
NNNTAATKHGYNNN		 PBM
Barrera et al.(2016)
PAX6_REF 		0.724 0.724
Pax6
M00540_2.00 		Mus musculus
CBAATTAA
TTAATTVG		 PBM
Berger et al.(2008)
Pax6_3838 		0.724 0.724
PAX6
M03291_2.00 		Homo sapiens
DTWYACGCWTGANTGMDYH
DRHKCANTCAWGCGTRWAH		 SELEX
Jolma et al.(2013)
PAX6_1 		0.724 0.724
PAX6
M05412_2.00 		Homo sapiens
NYACGCHYSRNYRMNYN
NRNKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX 		0.724 0.724
PAX6
M05414_2.00 		Homo sapiens
NYRCGCNYSRNYRVNYN
NRNBYRNYSRNGCGYRN		 SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX 		0.724 0.724
PAX6
M02689_2.00 		Homo sapiens
TTYACGCWTSANTK
MANTSAWGCGTRAA		 SELEX
Mathelier et al.(2014)
MA0069.1 		0.724 0.724
PAX6
M09216_2.00 		Homo sapiens
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C 		0.724 0.724
Pax6
M09217_2.00 		Mus musculus
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C 		0.724 0.724
PAX6
M10806_2.00 		Homo sapiens
NHNNTTYACGCWTSANTKVHH
DDBMANTSAWGCGTRAANNDN		 Transfac
Matys et al.(2006)
V$PAX6_01 		0.724 0.724
PAX6
M10807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX6_Q2 		0.724 0.724
PAX6
M00336_2.00 		Homo sapiens
RTGCACAC
GTGTGCAY		 PBM
Barrera et al.(2016)
PAX6_F258S 		0.724 0.724
PAX6
M00340_2.00 		Homo sapiens
NNNNNRN
NYNNNNN		 PBM
Barrera et al.(2016)
PAX6_R242T 		0.724 0.724
PAX6
M00344_2.00 		Homo sapiens
NNMSASGBYNNN
NNNRVCSTSKNN		 PBM
Barrera et al.(2016)
PAX6_V126D 		0.724 0.724
PAX6
M05413_2.00 		Homo sapiens
DYRCGCWTSRNYRMNYN
NRNKYRNYSAWGCGYRH		 SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX 		0.724 0.724
PAX6
M05415_2.00 		Homo sapiens
NYACGCHYSRNYRMHYN
NRDKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX 		0.724 0.724
PAX6
M00335_2.00 		Homo sapiens
BRNNNNNN
NNNNNNYV		 PBM
Barrera et al.(2016)
PAX6_A79E 		0.718 0.718
PAX6
M00337_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
PAX6_P118R 		0.718 0.718
PAX6
M00338_2.00 		Homo sapiens
WSGVRVDR
YHBYBCSW		 PBM
Barrera et al.(2016)
PAX6_P68S 		0.718 0.718
PAX6
M00339_2.00 		Homo sapiens
NNNNSGKVGGHNN
NNDCCBMCSNNNN		 PBM
Barrera et al.(2016)
PAX6_R128C 		0.718 0.718
PAX6
M00341_2.00 		Homo sapiens
BTSCCCSGSC
GSCSGGGSAV		 PBM
Barrera et al.(2016)
PAX6_R26G 		0.718 0.718
PAX6
M00343_2.00 		Homo sapiens
NNNNCCCVKCNBN
NVNGMBGGGNNNN		 PBM
Barrera et al.(2016)
PAX6_S119R 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000011964 Paired box 1 125
ENSETEP00000011964 Homeodomain 237 268

Links

Other Homeodomain,Paired box family TFs
Other Echinops telfairi TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLACG00000017470 Latimeria chalumnae ENSLACG00000017470 I 0.987
PAX2 Otolemur garnettii ENSOGAG00000015274 I 0.981
PAX2 Ochotona princeps ENSOPRG00000007096 I 0.981
Pax2 Mus musculus ENSMUSG00000004231 D 0.981
ENSPANG00000021132 Papio anubis ENSPANG00000021132 I 0.981
PAX2 Microcebus murinus ENSMICG00000001357 I 0.981
PAX2 Gorilla gorilla ENSGGOG00000014908 I 0.981
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.981
PAX2 Procavia capensis ENSPCAG00000006623 I 0.981
PAX2 Macaca mulatta ENSMMUG00000009163 I 0.981
ENSPPYG00000002572 Pongo abelii ENSPPYG00000002572 I 0.981
ENSP00000359319 Macaca fascicularis ENSP00000359319 I 0.981
Myotis_brandtii_PAX2_10025650 Myotis brandtii Myotis_brandtii_PAX2_10025650 I 0.981
pax2.L Xenopus laevis XB-GENE-486805 I 0.981
ENSP00000359319-D1 Bos grunniens ENSP00000359319-D1 I 0.981
PAX2 Tursiops truncatus ENSTTRG00000015106 I 0.981
PAX2 Pan troglodytes ENSPTRG00000002853 I 0.981
PAX2 Pteropus vampyrus ENSPVAG00000002148 I 0.981
PAX2 Sus scrofa ENSSSCG00000010556 I 0.981
PAX2 Homo sapiens ENSG00000075891 D 0.981
PAX2 Oryctolagus cuniculus ENSOCUG00000012860 I 0.981
PAX2 Dasypus novemcinctus ENSDNOG00000013328 I 0.981
PAX2 Equus caballus ENSECAG00000021123 I 0.981
PAX2 Callithrix jacchus ENSCJAG00000017397 I 0.981
PAX2 Canis familiaris ENSCAFG00000009709 I 0.981
ENSAMEG00000017523 Ailuropoda melanoleuca ENSAMEG00000017523 I 0.981
PAX2 Bos taurus ENSBTAG00000021566 I 0.981
PAX2 Erinaceus europaeus ENSEEUG00000001995 I 0.981
PAX2 Cavia porcellus ENSCPOG00000000939 I 0.981
PAX2 Felis catus ENSFCAG00000011602 I 0.981
ENSMPUG00000016955 Mustela putorius furo ENSMPUG00000016955 I 0.974
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.974
CAA04222 Xenopus laevis CAA04222 I 0.974
PAX2 Monodelphis domestica ENSMODG00000019353 I 0.974
ENSSHAG00000014328 Sarcophilus harrisii ENSSHAG00000014328 I 0.974
ENSMEUG00000013247 Macropus eugenii ENSMEUG00000013247 I 0.974
Gfo_R002455 Geospiza fortis Gfo_R002455 I 0.968
PAX2 Taeniopygia guttata ENSTGUG00000007620 I 0.968
Pax2 Dipodomys ordii ENSDORG00000006193 I 0.967
ENSFALG00000007308 Ficedula albicollis ENSFALG00000007308 I 0.962
CAA71206 Xenopus laevis CAA71206 I 0.962
PAX2 Myotis lucifugus ENSMLUG00000015106 I 0.962
ENSSTOG00000011575 Ictidomys tridecemlineatus ENSSTOG00000011575 I 0.952
ENSCSAG00000005568 Chlorocebus sabaeus ENSCSAG00000005568 I 0.952
Pvit_13858 Pogona vitticeps Pvit_13858 I 0.949
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.917
ENSAPLG00000014579 Anas platyrhynchos ENSAPLG00000014579 I 0.859
fgenesh2_kg.scaffold_131000004 Branchiostoma floridae fgenesh2_kg.scaffold_131000004 I 0.846
Sakowv30045649m.g Saccoglossus kowalevskii Sakowv30045649m.g I 0.808
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.737
pax6b Oryzias latipes ENSORLG00000009913 I 0.737
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.731
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.731
pax6a Danio rerio ENSDARG00000103379 I 0.731
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.731
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.731
ENSAMXG00000001228 Astyanax mexicanus ENSAMXG00000001228 I 0.724
pax6.S Xenopus laevis XB-GENE-6464331 I 0.724
Ogr12767 Ophisaurus gracilis Ogr12767 I 0.724
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.724
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.724
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.724
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I 0.724
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.724
pax6b Danio rerio ENSDARG00000045936 I 0.724
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.724
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I 0.718
pax6.L Xenopus laevis XB-GENE-865046 I 0.718
PAX6 Homo sapiens ENSG00000007372 D 0.718
ENSOARG00000015552 Ovis aries ENSOARG00000015552 I 0.712
AALB006643 Anopheles albimanus AALB006643 I 0.712
ACUA016154 Anopheles culicifacies ACUA016154 I 0.712
TTRE_0000173501 Trichuris trichiura TTRE_0000173501 I 0.705
CpipJ_CPIJ006398 Culex pipiens CpipJ_CPIJ006398 I 0.705
Sakowv30026828m.g Saccoglossus kowalevskii Sakowv30026828m.g I 0.705
CPIJ006398 Culex quinquefasciatus CPIJ006398 I 0.705
CGI_10026438 Crassostrea gigas CGI_10026438 I 0.705