CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG000346.1
(
Alligator sinensis
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00605 (IRF)
IPR001346
Alligator_sinensis_CCG000346.1
T244506_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG000346.1
IRF
88
183
VTGLRWEEVLDAVKAVRPIANPNPGFKQQLEEFGRGAVRKAWAVYKGKYQEGTDKADPSTWKTRLRCALNKSTDFQEVPERSQLDISEPYKVYQIV
Links
Other
IRF
family TFs
Other
Alligator sinensis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R015695
Calypte anna
Aan_R015695
I
0.965
Afo_R010468
Aptenodytes forsteri
Afo_R010468
I
0.965
Gfo_R005312
Geospiza fortis
Gfo_R005312
I
0.947
ENSPSIG00000003518
Pelodiscus sinensis
ENSPSIG00000003518
I
0.911
Cmyd_10009547
Chelonia mydas
Cmyd_10009547
I
0.897
IRF8
Tursiops truncatus
ENSTTRG00000016024
I
0.818
XP_002934991
Xenopus tropicalis
XP_002934991
I
0.818
ENSSSCG00000022547
Sus scrofa
ENSSSCG00000022547
I
0.772
IRF4
Choloepus hoffmanni
ENSCHOG00000012417
I
0.768
ENSMICG00000011721
Microcebus murinus
ENSMICG00000011721
I
0.768
ENSTSYG00000006495
Tarsius syrichta
ENSTSYG00000006495
I
0.768
IRF8
Equus caballus
ENSECAG00000015449
I
0.763
Tal_R010571
Tyto alba
Tal_R010571
I
0.759
ENSPANG00000023389
Papio anubis
ENSPANG00000023389
I
0.754
ENSP00000370343
Macaca fascicularis
ENSP00000370343
I
0.746
IRF4
Ornithorhynchus anatinus
ENSOANG00000006326
I
0.721