CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g021590
(
Brassica oleracea
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Bo9g021590
T245025_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g021590.1
LOB
7
105
PCSACKFLRRKCTRECVFAPHFPPDQPNKFSCVHKAFGASNVAKLLSELPLNQREDAVTSLVYEAETRIQEPVYGCVGLISLQQQRLKQIQRDTDVARR
Links
Other
LOB
family TFs
Other
Brassica oleracea
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra037142
Brassica rapa
Bra037142
N
0.939
PK18922.1
Cannabis sativa
PK18922.1
I
0.772
VIT_00s0215g00010
Vitis vinifera
VIT_00s0215g00010
I
0.759
cassava32691.m1
Manihot esculenta
cassava32691.m1
I
0.747
Bostr.0568s0111
Boechera stricta
Bostr.0568s0111
I
0.737
gene24088-v1.0-hybrid
Fragaria vesca
gene24088-v1.0-hybrid
I
0.737
Cagra.20099s0001
Capsella grandiflora
Cagra.20099s0001
I
0.737
Solyc02g090410.2
Solanum lycopersicum
Solyc02g090410.2
I
0.737
POPTR_0005s14150
Populus trichocarpa
POPTR_0005s14150
I
0.737
Bo2g167820
Brassica oleracea
Bo2g167820
I
0.737
Carubv10026811m.g
Capsella rubella
Carubv10026811m.g
I
0.737
PGSC0003DMG400010023
Solanum tuberosum
PGSC0003DMG400010023
I
0.737
SapurV1A.0428s0090
Salix purpurea
SapurV1A.0428s0090
I
0.737
Pm026450
Prunus mume
Pm026450
I
0.727
LBD36
Arabidopsis thaliana
AT5G66870
I
0.727
Ciclev10027275m.g
Citrus clementina
Ciclev10027275m.g
I
0.727
Lus10005313.g
Linum usitatissimum
Lus10005313.g
I
0.727
SapurV1A.0641s0140
Salix purpurea
SapurV1A.0641s0140
I
0.727
ASL1
Arabidopsis lyrata
fgenesh2_kg.8__2729__AT5G66870.1
I
0.727
Thhalv10004535m.g
Eutrema salsugineum
Thhalv10004535m.g
I
0.727
SapurV1A.0811s0020
Salix purpurea
SapurV1A.0811s0020
I
0.727
POPTR_0007s11460
Populus trichocarpa
POPTR_0007s11460
I
0.727
orange1.1g039589m.g
Citrus sinensis
orange1.1g039589m.g
I
0.727
PRUPE_ppa026393mg
Prunus persica
PRUPE_ppa026393mg
I
0.727
F775_33210
Aegilops tauschii
F775_33210
I
0.726
Gorai.008G073400
Gossypium raimondii
Gorai.008G073400
I
0.717
cassava32690.m1
Manihot esculenta
cassava32690.m1
I
0.717
Solyc02g065150.1
Solanum lycopersicum
Solyc02g065150.1
I
0.717
TCM_000560
Theobroma cacao
TCM_000560
I
0.717
Aquca_007_00083
Aquilegia coerulea
Aquca_007_00083
I
0.717
cassava16840.m1
Manihot esculenta
cassava16840.m1
I
0.717
PGSC0003DMG402000764
Solanum tuberosum
PGSC0003DMG402000764
I
0.717
Cucsa.250570
Cucumis sativus
Cucsa.250570
I
0.717
Bo7g064360
Brassica oleracea
Bo7g064360
I
0.717
Bra012112
Brassica rapa
Bra012112
I
0.717
VIT_00s1247g00010
Vitis vinifera
VIT_00s1247g00010
I
0.707
MDP0000310871
Malus domestica
MDP0000310871
I
0.707
cassava16846.m1
Manihot esculenta
cassava16846.m1
I
0.707
evm.TU.supercontig_6.423
Carica papaya
evm.TU.supercontig_6.423
I
0.707
MDP0000562305
Malus domestica
MDP0000562305
I
0.707
Gorai.007G210500
Gossypium raimondii
Gorai.007G210500
I
0.707
Gorai.011G104600
Gossypium raimondii
Gorai.011G104600
I
0.707
VIT_07s0197g00020
Vitis vinifera
VIT_07s0197g00020
I
0.707
PK17019.1
Cannabis sativa
PK17019.1
I
0.706